| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2874 |
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| Symbol | |
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| ID | 5369923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3451369 |
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| End bp | 3452286 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640831118 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001367071 |
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| Protein GI | 153001390 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACGATA ACACCTTGAA TCAAGAAACC GACACTCCTT TATCTCAGCA GCACATCACT
CAGTACACGC AGGTCGCACC TTCACGTTTA GCCGCCGCAG GGCTAAGTGC CTCCATCATG
TTGCTTAAAC GAACACTCAA GCCGTTTGAA CATGTGCAGC GCCATAGTCA TCCTTGGGGA
CAGGTCATTT ATGCCAGCCA AGGTGTGTTG AGTGTGATCA CGCCTGCTGG GCGTTACATT
GTGCCGCCTG AACAAGCTGT GTGGGTGCCT CCCTTTGTTG ATCATGAGGT TATCGCGCTA
GGTCAGGTGC AATTGAGCAG TCTGTATTTG GATGAAACCC AGATCGGCGG TTTTCCACCC
GACTGTACTT GTTTGAGTGT GAAGCCTGTT TTGCAGTTGT TACTGCAAGA GGCTAATGCC
TTGATGAAGA GTGAGGCTGG GCTGATTGAG CCTGATGATA AGGATAGCGT CATGCGACTC
TTGATGGTGA TCCGTGACTT TATGGTGCTC GCACCTAAGG TAGCCTTGGA TTTACCTTAT
CCTAAGGATA AAAAATTACT GCGCATTACC GAGGCTTTGC TTGCAGATCC GAGCGAGCAA
CGCACTTTGG TGGATTGGCA GCGGGAGGTC GGCGCCTCGG CCCGCACGTT AGCGAGATTA
TTTAAACAGC AAACAGGGCT GAGTTATAGC CAATGGCTGC AAAGGCTTAG ATTGCAGGTG
GCGATTCAAA TGCTCAGTCG AGGTGAATCT GTGCTCACCA CCGCGTTATC TTTAGGTTAT
GCCTCGGGTT CAGCCTTTGG TTATATGTTT AGGCAGTTGA TGGGCGTCGC TCCGAGTCAG
TACCTGTTAG CGCAAAATAC CATGCCAAAA GTACAGTGCC AAAAATACAA AGATAAACAG
CCACAGATAA AAAAGTAA
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| Protein sequence | MDDNTLNQET DTPLSQQHIT QYTQVAPSRL AAAGLSASIM LLKRTLKPFE HVQRHSHPWG
QVIYASQGVL SVITPAGRYI VPPEQAVWVP PFVDHEVIAL GQVQLSSLYL DETQIGGFPP
DCTCLSVKPV LQLLLQEANA LMKSEAGLIE PDDKDSVMRL LMVIRDFMVL APKVALDLPY
PKDKKLLRIT EALLADPSEQ RTLVDWQREV GASARTLARL FKQQTGLSYS QWLQRLRLQV
AIQMLSRGES VLTTALSLGY ASGSAFGYMF RQLMGVAPSQ YLLAQNTMPK VQCQKYKDKQ
PQIKK
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