Gene Shew185_2854 details

Gene Information

• Locus tag: Shew185_2854
• ID: 5369748
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 3422454
• End bp: 3423056
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640831098
• Product: ThiJ/PfpI domain-containing protein
• Protein accession: YP_001367051
• Protein GI: 153001370
• COG category: [K] Transcription
• COG ID: [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACCAGA TTGCGATTGT GATATTTGAT GAATTTACCG ATATCGATTT CTTCTTAATG 
CGCGATATTC TCGGCCTTAC AAAAACCGAT TGGACAGTAA AAGTACTCGG GATAAAGCCT 
AGCCACAGGT CGAGTTTGGG GATGACGGTT GCAACCGATG GTCATGTGGC CGAAGTCACT 
GATGCCGACG TGGTGTTATT TAGCAGTGGC TACAAAGGCG TGCCAGCCGC GCTCGAAGAT 
ACTGAGTTTA TGTCTGCCCT TAAATTAGAT CCCACACGGC AATTGCTTGG CAGTATCTGC 
GCGGGGTCAT TCTTCTTTGC CAAATTAGGG CTACTCGACA ATCTCTCGGC AACGACTCAC 
CCCGATGCAA AACCCGCATT AGTGGCCATG GGCGTCGATG TAGAAGACTG TGCTCTGGTT 
ATCAATGGCA ATATTGCCAC CGCGGGTGGC AGCCTGTCCT CACTCTATTT AACCGGCTGG 
GTCGCTGAGC GCTTATTCGA CAGTGCAAAA CGCCGCGAAA TACACAGGCA GCTTATTCCT 
GCAGGCCAAG CTGATATTTA TGAGACGCTG ATCCAATCAT CAATAGCAGC TGCAATTCGC 
TAG 

 

Protein sequence

MYQIAIVIFD EFTDIDFFLM RDILGLTKTD WTVKVLGIKP SHRSSLGMTV ATDGHVAEVT 
DADVVLFSSG YKGVPAALED TEFMSALKLD PTRQLLGSIC AGSFFFAKLG LLDNLSATTH 
PDAKPALVAM GVDVEDCALV INGNIATAGG SLSSLYLTGW VAERLFDSAK RREIHRQLIP 
AGQADIYETL IQSSIAAAIR