| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2545 |
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| Symbol | |
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| ID | 5369449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3043654 |
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| End bp | 3044775 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640830757 |
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| Product | porin |
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| Protein accession | YP_001366744 |
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| Protein GI | 153001063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000114495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAA CCGTAAAAGT AAGGTTTACA CCAATGAAAA CATGTCATAT TTCACGTAAA
ACAGCCCTGA TTATTGCCAT GGGTTTAAGC GCCTCACAGG CCTATGCGGC CGAGGCCGAT
GCGTTATCGA CACAGGTGGA AGCGCTCAAT CAACGCATTG CACAATTAGA GCAAAACACG
GCACCGTCAC AGTTTAAAAA CAGCCAAGTC AGCCTGTACG GCTCGATTCG CCCAACCTTA
AGCTACCTTG ATGAAGGTGA TGAACAAACA TGGGACGTTA GGGATGCACT GTCTCGTATC
GGCATTAAAG CCAGCACAGA ATTTGCCGAT GGCTGGCAAG CCATTGCTCA AGGTGAATGG
AATGTTGATA TTGCCAATTC AGGTAACTTT GGCAAAGCCC GTCAAGCTTA TGCCGCTATT
GCTTCACCTT ACGGCCAAGT CGGTATAGGT AAACAGCGCC CAGCGCAATA CACCTTAGTG
GCCGAGTACG TGGATATCTT TAACCACGGC AACAGCCCAT ATGCCTATGA TCACGAAAGT
CCATTTTTTG TCGATAACTT TGTCACCTAC CAATTGGTCA GCAATGGCTT AACCTTTATG
GCAGGTGTGC AAGTTGATGG TAACCAAGGC GACAGTAATG CCGATATGAT TAACCTTGGT
TTGGGCTACG ACACTGGCGC CCTGCATTTA GGTTTAGGTT ATGTCACCCA AGACACCCTA
ATTGACGGTA AAGTCGGCGG TGATAACCAA ACATTGGGCG GTGTAGCGGC TTATACCTTT
AACAACGGTC TCTATGTCGC CGTTAGCTAC CAAGACAAGC AATATAATTT CGACCAGTCA
CTCACCAATG CCGACCGCAG TGGCAGCACT TTAGATACGG CGTTGGCCTA TCCACTCAAC
GATGAGTACA AAATCAAACT AGGGTATTTT CAGTTTAAAG ATGGCATCAA GGGTAATGGC
TCTGCTGACT ACGATGGCTT TAACACCACA CTAGAGTGGA ATCCTCTCAG CAATGTGCGT
GTGCACCTTG AGTACCTGGA TAAAAGCTTG GAGAACGGCA ACGATGACCA AGCAGTAACT
ATCGGCTTTA GATATGACTT CAACCTGACT TGGCAAGGCT AA
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| Protein sequence | MPKTVKVRFT PMKTCHISRK TALIIAMGLS ASQAYAAEAD ALSTQVEALN QRIAQLEQNT
APSQFKNSQV SLYGSIRPTL SYLDEGDEQT WDVRDALSRI GIKASTEFAD GWQAIAQGEW
NVDIANSGNF GKARQAYAAI ASPYGQVGIG KQRPAQYTLV AEYVDIFNHG NSPYAYDHES
PFFVDNFVTY QLVSNGLTFM AGVQVDGNQG DSNADMINLG LGYDTGALHL GLGYVTQDTL
IDGKVGGDNQ TLGGVAAYTF NNGLYVAVSY QDKQYNFDQS LTNADRSGST LDTALAYPLN
DEYKIKLGYF QFKDGIKGNG SADYDGFNTT LEWNPLSNVR VHLEYLDKSL ENGNDDQAVT
IGFRYDFNLT WQG
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