| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2088 |
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| Symbol | |
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| ID | 5371832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2494142 |
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| End bp | 2495782 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640830297 |
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| Product | prophage MuSo1, portal protein, putative |
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| Protein accession | YP_001366293 |
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| Protein GI | 153000612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4373] Mu-like prophage FluMu protein gp28 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0947183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTA AAAAAAAGGT GTTAGTGGCC GCGACTGCGG TAGCGCTAGC CATCACGCCA
ACAGCAAGCA GCTTTGATCC CACGTATGAG GCAAGTTGCC TAAGTCGCTT TGATCCTAAA
GAGGTGCTGC TCGGTTATCA GAAACGCTGG ATAGCCGACG AGTCACCGCT GAAAATTGCC
GAAAAGTCGC GCCGAACCGG ACTCACTTGG GCTGAGGCTG CCGATGCTTC TCTTACCGCA
GGCGCAGCCC GTGGCCAAGG GGGGACTAAC CATTTTTATG TGGGCAGTAA CAAGGAGATG
GCACGGGAAT TTATCGACGC TGCGGCCATG TGGGCCAAAG TATTTGATAA AGCAGCAGGT
GAAATCCAAG AAGAAGTGTT TGTTGATGAA GGCCAAGACG GTAAAGAGAT CCTGACCTTT
GCCATTTACT TTGCCTCAGG TTTTAAGGTG CAGGCGCTAT CGAGTAATCC CTCAAACCTG
CGTGGTATGC AAGGCAATGT GACTATAGAC GAAGCGGCGT TCCACGAACG CTTGGCCGAA
GTACTAAAAG CGGCATTGGC GCTGACCATG TGGGGCGCGA AGGTACGCTT GATCTCCACC
CATAATGGCA TTGATAACCA GTTCAATGAG CTGATTAACG ATTCCCGTGC GGGTAAAAAA
GATTACTCCA TTCACCGCGT CACCTTAGAT GATGCCTGTA ATGAGGGGCT GTATAAGCGT
ATTTGCCAAG TGCGCGGCAT CGAATGGAGC CAAGCGGCCG AGGATGACTG GAAAGCAAAA
TTACTCAAAG CCACTGCCAC TGAAGAGGAT GCGTTAGAAG AATACTTCTG TGTGCCTAAG
TCTGGCGGTG GTGCCTATCT TAACCGCGCG TTAATCGAGG CCCGCATGGC GAGCATCGCT
GATAGCGGCC CCGTTGTTCG CCTTAAAAAA GACGATGCTT TTGGACAATG GCCAGAGGGT
TTACGAGCGG CGGAGCTCCT TAAGTGGTGT GAGGATGAAC TGAAGCCGGT TCTCGATAGC
TTAGACCCTG CACGCCCTCA TTGCTTTGGT GAAGACTTTG CCCGTAGTGG TGACTTAACC
GTGATTGACG TGGGGGAAAT CGCCCAAGAT CTCCACATTA AAACCAAGTT ACAGGTTGAG
CTTAAAAACA TTCCCTTTCG CCAACAAGAG CAGATCCTGT TTTACATTGT GGACCGCTTA
CCACGGCTGA GGGGCGGCGC GATGGATGCG CGCGGGAATG GTCAAGCGTT AGCGGAATAC
GCCCAGGATA AATACGGCAG TGAAGTGATC GCCTGTGTGA TGCTATCTGA GTCCTTTTAC
CGCGAGCAAA TGCCACGCTT TAAAAGCCAC TTTGAAGATG GGCTGTTAAC TATCCCAAGG
GATGACGACA CCTGTACTGA CCTGCGGGCC TTAAGCATTA ACCGCCGAGG TACGCCATGC
CTTGGCGATG TGCGGACAGG CCAAGAAAAA GAACGCCATG GTGATGCCGC GATCAGCCTG
TTCTTGATGG TATACGCCTC AACCTTAGAC GGTGCCCCCA TAGAGTTCAC CCCCATTCCT
AGAAGTGATC ACCGTAATCC GAATGCCGCA GCAAGTGCCC ATGAGGATGA TGATCATCAA
ACGCAGCGAG GTTGCTGGTA A
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| Protein sequence | MTIKKKVLVA ATAVALAITP TASSFDPTYE ASCLSRFDPK EVLLGYQKRW IADESPLKIA
EKSRRTGLTW AEAADASLTA GAARGQGGTN HFYVGSNKEM AREFIDAAAM WAKVFDKAAG
EIQEEVFVDE GQDGKEILTF AIYFASGFKV QALSSNPSNL RGMQGNVTID EAAFHERLAE
VLKAALALTM WGAKVRLIST HNGIDNQFNE LINDSRAGKK DYSIHRVTLD DACNEGLYKR
ICQVRGIEWS QAAEDDWKAK LLKATATEED ALEEYFCVPK SGGGAYLNRA LIEARMASIA
DSGPVVRLKK DDAFGQWPEG LRAAELLKWC EDELKPVLDS LDPARPHCFG EDFARSGDLT
VIDVGEIAQD LHIKTKLQVE LKNIPFRQQE QILFYIVDRL PRLRGGAMDA RGNGQALAEY
AQDKYGSEVI ACVMLSESFY REQMPRFKSH FEDGLLTIPR DDDTCTDLRA LSINRRGTPC
LGDVRTGQEK ERHGDAAISL FLMVYASTLD GAPIEFTPIP RSDHRNPNAA ASAHEDDDHQ
TQRGCW
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