| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1998 |
|---|
| Symbol | |
|---|
| ID | 5369843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2379195 |
|---|
| End bp | 2380094 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640830202 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366204 |
|---|
| Protein GI | 153000523 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.746729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGGAA GAGATTTGAA TAATACAAAA GGTAGTCTGT TTATGGTGGC TGCGATGGCA
GCATTTTCTA TTGAAGACAT GCTCATCAAG TCTGCAGCAG AAACCACCTC TATCGGCCTC
ATTTTAGCGT TATTTGGCCT AGGTGGGATG TTGATTTTTA TACTGTTAAC CTGGCGCAAG
GGCGAAACAG TGCTTCACCC AGCGGCATTG TCGGCCCCCA TACTGTTACG CGCATTGTGT
GAAGTGATCG GCCGCTTCTG TTTTGCTTTA GCGATCACCT TAACACCACT ATCAAGTGCA
TCCGCTATTT TGCAAGCCAC ACCTCTAATA GCCATGATTG GCGCCGCCTT GTTATTCGGT
GAACAAGTAG GCCATAAAAG ATGGCTTGCG GTATTGGTTG GTTTTGTGGG CGTACTGATG
ATCATTCGCC CAGGGCTTGA TGGCTTTGAA GCCACCTCTT TATTTGCCGT TATCGCTACC
TTAGGTTTTG CAGGACGCGA TTTAGCAACC CGTGCCGCAT CACCCGTGTT ATCTAACATG
CAACTCGGGG TGTATGGCTT TTTTGTGTTA ATTCCGACAG GCTTAGCCAT AATGATGTAC
CAAAATGAGC CCTTACAGTT TAGTACCACT GAGGCAACAC AAATTCTGGG AGCCATCGTC
TTTGGTGTCA TGGCCTACAA TGCGCTGACA ATCGCTATGC GCGCTGGAGA TGTCTCAGTA
GTCAGCCCCT TTCGGTATAC ACGTTTACTG TTTGCCTTAG CGTTAGGCAT ATTGATATTT
GGAGAATCAC CAGATTTACT GACACTTCTA GGGAGCTTAC TCATAGTATT AAGTGGCGGC
TATACGTTAA TCCAAACGCG TAAAAGAACC ACGACGAATA ACATACCTAA TGCGGCATGA
|
|---|
| Protein sequence | MLGRDLNNTK GSLFMVAAMA AFSIEDMLIK SAAETTSIGL ILALFGLGGM LIFILLTWRK
GETVLHPAAL SAPILLRALC EVIGRFCFAL AITLTPLSSA SAILQATPLI AMIGAALLFG
EQVGHKRWLA VLVGFVGVLM IIRPGLDGFE ATSLFAVIAT LGFAGRDLAT RAASPVLSNM
QLGVYGFFVL IPTGLAIMMY QNEPLQFSTT EATQILGAIV FGVMAYNALT IAMRAGDVSV
VSPFRYTRLL FALALGILIF GESPDLLTLL GSLLIVLSGG YTLIQTRKRT TTNNIPNAA
|
|---|
| |