| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1880 |
|---|
| Symbol | |
|---|
| ID | 5369456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2245243 |
|---|
| End bp | 2246178 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640830083 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366086 |
|---|
| Protein GI | 153000405 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2253] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.118335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGT CATCGATATA CTACCAGCAA GTGACCTTGC TTATTCGGAT GCTGCCGCTC
GTCGCCCAAG AGAAGGTATT TGCTCTAAAG GGCGGTACGG CTATCAACCT ATTTGTGCGC
AACTTCCCAC GATTATCGGT CGATATCGAT TTGGCTTATC TTCCTTTGGA GCCAAGGGAA
CAAGCGCTAC AAAGTGTGAA GGAAGCGCTT GGTCGTTTGA CTGCGCAGAT CAATCTACAA
CCGAACCTTA GTGCAGTATT TCAAGACAAT AAATATGATG AGCTCAGGGT CGTCGTGACA
AGTGATAGAG TGACAATAAA AATTGAAGTC TCTCCTGTTG CGAGAGGTAC GCTACACAAA
GCGGTATTAA TGCCAGTCGT TGAGTTAGTT GAAGAAGAAT TTGGGTACGC AGAGATCCCC
GTCGTAAGCC TGCCTGATCT ATACGGTGGT AAGTTATGTG CAGCGATGGA TAGACAGCAC
CCAAGGGATC TATTTGATGT GAAAATGCTG CTGGCGGAAG AGGGGATCAC TCGAGAGATT
TTAGTCGGCT TTCTCACTTA TACACTTAGC CATCCAAGGC CTATTAATGA AGTGATGTCT
CCACGCTGGA AACCGCTTGA TGAAAGCTTT CAAACTGAAT TCAATGGAAT GACGACAAAG
CCGATTAAAC TCGATGAGCT TATTTTAACT CGCTCAGAAA TGCTGACAGC GTTGCAGCAT
CACTTTACTG CAAAAGACAG AGACTTTTTA TTATCCTTTA AACAGGGTCA GCCTGATTGG
TCATTGTTTG ATGAACCGAG CGTCGCGGCA CTACCTGCGG TGAGATGGAA GCTATTGAAT
ATCCAAAACC TAGCGAAAAA CAAATCCAAG CATCAAGAAC AACTCATTAA ACTGGCTGAT
GTATTGGAAA CGTGGGTTGC AGGTCGGATA CTGTAA
|
|---|
| Protein sequence | MNKSSIYYQQ VTLLIRMLPL VAQEKVFALK GGTAINLFVR NFPRLSVDID LAYLPLEPRE
QALQSVKEAL GRLTAQINLQ PNLSAVFQDN KYDELRVVVT SDRVTIKIEV SPVARGTLHK
AVLMPVVELV EEEFGYAEIP VVSLPDLYGG KLCAAMDRQH PRDLFDVKML LAEEGITREI
LVGFLTYTLS HPRPINEVMS PRWKPLDESF QTEFNGMTTK PIKLDELILT RSEMLTALQH
HFTAKDRDFL LSFKQGQPDW SLFDEPSVAA LPAVRWKLLN IQNLAKNKSK HQEQLIKLAD
VLETWVAGRI L
|
|---|
| |