Gene Shew185_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1799 
Symbol 
ID5370109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp2161264 
End bp2161857 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID640830002 
ProductDoxX family protein 
Protein accessionYP_001366005 
Protein GI153000324 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.534282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACTTG CATCCCTTTA CCAAAAATTG CTCAATATGA GTCGCTATTT CGATGGCGTA 
GCGCCATTAG CCCTCAGGAT TTACCTTGCG CCCGTGTTGA TGCAAGCGGG TTATAACAAG 
CTCGCCCACT TTGACGATAC GGTTGCTTGG TTTGCCAATC CCGATTGGGG TTTAGGCCTG 
CCAATGCCGG CGGTAATGGC AGGATTGGCG GCGGGAACCG AGTTCTTTGG CGCTATCTTA 
TTAATGCTTG GGCTTGCGAC GCGGCTGATA TCTATCCCTT TGATGGTCAC TATGTTGGTC 
GCCGCATTTA CAGTGCATTG GCCAAATGGC TGGTTAGCGA TTGCCGATGG CAGTTCTTGG 
CTTGCCAACG ACAGAGTGCT TGAGGCTGGG GATAAACTGG CGAAAGCCAA AGAAATATTG 
CAGGAGCACG GTAATTACGA CTGGCTGACC AGCTCAGGTA ACTTAGCTGT GCTTAATAAT 
GGGATAGAGT TTGCGGCAAC TTATTTCATT ATGTTGTTGG CACTCTTTAC CTTAGGCGGC 
GGTCGTTACA CTAGCCTAGA TTATTTTATC GCTAAGCGCT GCGGGGTTAA GTAA
 
Protein sequence
MPLASLYQKL LNMSRYFDGV APLALRIYLA PVLMQAGYNK LAHFDDTVAW FANPDWGLGL 
PMPAVMAGLA AGTEFFGAIL LMLGLATRLI SIPLMVTMLV AAFTVHWPNG WLAIADGSSW 
LANDRVLEAG DKLAKAKEIL QEHGNYDWLT SSGNLAVLNN GIEFAATYFI MLLALFTLGG 
GRYTSLDYFI AKRCGVK