Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1793 |
Symbol | |
ID | 5373570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2154997 |
End bp | 2155446 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829996 |
Product | hypothetical protein |
Protein accession | YP_001365999 |
Protein GI | 153000318 |
COG category | [R] General function prediction only |
COG ID | [COG5633] Predicted periplasmic lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000107355 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATG ATGCGCGCTG GCCGCGCATT TTGTCGCGTG ACTGGGAGAA AGAGATGAAA CAAATTTATA CAGGACTATT ATTGACCGCG GCGCTGACCT TAGGCGCTTG TGCCTCACAT ACCGCAGGTA TTTCAGTGAG TTCATCGGGT GAAACCCGCG TCGATAATTC CAGCTTTGCC CGAGATATTG CGGTACAGAG TGTGGATGCA CGCCGAGTTG GCGATTTAGT GCAGGGCTCA GCGCTGATTG TCAGCAAATC GTCTACCGAT ATGCGTGTGC AGTATAAATT CACTTGGTAC GATGCCAGCG GCTACACCAT AGAAGATGAA GCGACAAGCT GGAAATCAGT CAAGTTGCAT GGCAAGCAAC AATTGCAAGT CGCCGCCGTG GCGCCCAATG CCCAAGCGGT TAAATTTGAT GTGTACGTGC GCGAAACCTT TTCGAATTAA
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Protein sequence | MGNDARWPRI LSRDWEKEMK QIYTGLLLTA ALTLGACASH TAGISVSSSG ETRVDNSSFA RDIAVQSVDA RRVGDLVQGS ALIVSKSSTD MRVQYKFTWY DASGYTIEDE ATSWKSVKLH GKQQLQVAAV APNAQAVKFD VYVRETFSN
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