Gene Shew185_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1793 
Symbol 
ID5373570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2154997 
End bp2155446 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content50% 
IMG OID640829996 
Producthypothetical protein 
Protein accessionYP_001365999 
Protein GI153000318 
COG category[R] General function prediction only 
COG ID[COG5633] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000107355 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATG ATGCGCGCTG GCCGCGCATT TTGTCGCGTG ACTGGGAGAA AGAGATGAAA 
CAAATTTATA CAGGACTATT ATTGACCGCG GCGCTGACCT TAGGCGCTTG TGCCTCACAT
ACCGCAGGTA TTTCAGTGAG TTCATCGGGT GAAACCCGCG TCGATAATTC CAGCTTTGCC
CGAGATATTG CGGTACAGAG TGTGGATGCA CGCCGAGTTG GCGATTTAGT GCAGGGCTCA
GCGCTGATTG TCAGCAAATC GTCTACCGAT ATGCGTGTGC AGTATAAATT CACTTGGTAC
GATGCCAGCG GCTACACCAT AGAAGATGAA GCGACAAGCT GGAAATCAGT CAAGTTGCAT
GGCAAGCAAC AATTGCAAGT CGCCGCCGTG GCGCCCAATG CCCAAGCGGT TAAATTTGAT
GTGTACGTGC GCGAAACCTT TTCGAATTAA
 
Protein sequence
MGNDARWPRI LSRDWEKEMK QIYTGLLLTA ALTLGACASH TAGISVSSSG ETRVDNSSFA 
RDIAVQSVDA RRVGDLVQGS ALIVSKSSTD MRVQYKFTWY DASGYTIEDE ATSWKSVKLH
GKQQLQVAAV APNAQAVKFD VYVRETFSN