Gene Shew185_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1541 
Symbol 
ID5372088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1863343 
End bp1863924 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content47% 
IMG OID640829737 
Producthypothetical protein 
Protein accessionYP_001365751 
Protein GI153000070 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.597529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CCTTAGCCCG CGGCTTAATG AATCTATTAC CTATGGCCTT GAGTTTGTGG 
CTGTTTTGGT CGCTGTTTGT ATCGTTAGAT GGTTTAGGAA TTGTGATTTT AGAGTTGGTA 
GGGATTAACC AACACTTTGT TGGCGCCGGT TTTATGCTGG TGGTGGCATT AGTTTTTGCC 
GTGGGTTTGC TGTTTTCGGT CAGTCCTATT GTGTGGCTTT ATGGCTGGCT TGAGCGCCAG 
TTGATGCGTT TCCCACTGTT TAAATCGGTT TATGGCAGTA TCCGTGATAT CGCCTCTTTG 
ATGAATCGAG ATGGCAAGCC GACCAGCCAA AAGACTGTGT TAGTTAAACA GGCTAATGGC 
AGTTTTGTGG TGGGATTTAT CATGACAGAT ACGCCGCCTC AGCCATTGTT AGATGCGTTG 
CCTGAGGGCG ATTGGGTGCC TGTGTTGTTC CAATTGAGTT ACCAAATGGC GGGCGTGACG 
AGCTTGATCA AACGGGACGA TTTAATCATG GTCGACTGGT CGTTTGAAGA GGCGATGCGC 
TTTAATTTAA CCGCTGGCAT TTCGCAAACA CCGTCTCAGT AA
 
Protein sequence
MKKTLARGLM NLLPMALSLW LFWSLFVSLD GLGIVILELV GINQHFVGAG FMLVVALVFA 
VGLLFSVSPI VWLYGWLERQ LMRFPLFKSV YGSIRDIASL MNRDGKPTSQ KTVLVKQANG 
SFVVGFIMTD TPPQPLLDAL PEGDWVPVLF QLSYQMAGVT SLIKRDDLIM VDWSFEEAMR 
FNLTAGISQT PSQ