Gene Shew185_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1523 
Symbol 
ID5373588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1842086 
End bp1843357 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content40% 
IMG OID640829720 
Producthypothetical protein 
Protein accessionYP_001365734 
Protein GI153000053 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGAT TATTCTTATT GTCGGCTGTT TTAGCGATCA GCATGCCTTT ATCGGCTGCA 
ACAAAGACCG CAACTAGAGA AATTGAAATA GAGTCTCAAG GTACTTCGTA TCAATCTGCA
GTCAACGAAG CATTAGTAGA CGCCATATCA AGAGTACACG GAAAACAAAT TTCTTCAGAA
AAGCTTTCAG AGTCTGTCGA GGTGTCTGTA GCTGACGGTG CCCAGCAAGA CTATCTCTCC
GGTGACGCAT ATCAAAGCCA AATTAGAGAA AAAACTGAAG GCATGGTTTT AGGGTTTGAA
GTTTTAAACT CAGAACAAAT ATCTGACAAT AAATGGTCTG TATTAGTTAA AGTTCAGGTT
GCCGACTATA AGAAGTCAGA AAGTGCAGAT AGACAACGTA TTGCAGTACT TCCATTTAAA
ACTACAAAGC AGGCATTTAG TTTGGCCGGA CAAAGTACAA AGGCCGAAAC CGTAGCAAAC
ACTTTAAGTT CTTCTGTTAT TGAGAAGCTG GTAACTACGC GCAAATTTGC GATTCTAGAC
CGAGATTTTG ATGAGTCGAC AAAAAGTGAA TTGGCTAGGA TTAGCACTGG CGATGTGGCC
CCCGCAGAAT TCTCCCGCCT TACTCAAGGG CTGATAGCCG ACTATGTATT AGTCGGTGCT
ATAGATGCCT TAAATTTTGA CCTTTATGAA CGAACAATGA GGACCTCAGA TAAGAAATTT
GTCAGTGGTC AAGGGCGTAT CAAAGTTTCA TTTCGTCTAA TTGAAGTCGC CACCTCACAA
ATTGTCTTTA GTGGGTCAGC AAGTTCTGAA TTAACTGATA AAAATCTGGC GAATGGCGTG
CAAACCTCTG CAACCGAAAT AATTCAACAG TTCAACTCTA AAATTGCAGC GTCGATTGTG
CGTGATACTA CTGATCAAAT TTATCCTCTA ACCATTGTTG GTCGACAAGG TGATGAAGTT
ATAGTTTCCG AAGGTAGTTC TACGCTAAAA GAAGGACAGC AATATCAGGT TTTTCGTCGA
TTAGAGAAAA TTGTTGACCC ATACACCAAT GAACTCATCG GTTGGTCGGA AGAATTTTGC
TGCGAAGTTC AGATAACACG CGTCACTACA AGACTTTCAT ATGGAACACT CTCAAAGCTG
AAAATGGAAT TACCTGAATC GATAAAGCCT AAAACATTAA TGCTTAGAGA AATTAAGAAA
ACAAATATCA TATCTAAGAA GCCAACTTCT GCGCAAAAAC CAATTACCCC AAAAGAAAGT
AAAGACTGGT AA
 
Protein sequence
MYRLFLLSAV LAISMPLSAA TKTATREIEI ESQGTSYQSA VNEALVDAIS RVHGKQISSE 
KLSESVEVSV ADGAQQDYLS GDAYQSQIRE KTEGMVLGFE VLNSEQISDN KWSVLVKVQV
ADYKKSESAD RQRIAVLPFK TTKQAFSLAG QSTKAETVAN TLSSSVIEKL VTTRKFAILD
RDFDESTKSE LARISTGDVA PAEFSRLTQG LIADYVLVGA IDALNFDLYE RTMRTSDKKF
VSGQGRIKVS FRLIEVATSQ IVFSGSASSE LTDKNLANGV QTSATEIIQQ FNSKIAASIV
RDTTDQIYPL TIVGRQGDEV IVSEGSSTLK EGQQYQVFRR LEKIVDPYTN ELIGWSEEFC
CEVQITRVTT RLSYGTLSKL KMELPESIKP KTLMLREIKK TNIISKKPTS AQKPITPKES
KDW