| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1401 |
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| Symbol | |
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| ID | 5372068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1685648 |
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| End bp | 1688284 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829600 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001365614 |
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| Protein GI | 152999933 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAG GTCAATTATT TAAGAGCTCT TTGCTCGCAT TGTGTATCGC TAACGCCTTA
TTCGGGATGA GCTCAACCGC AGTCGCGGCA GAGCAACAAG AGGCAACGGC AGAAAAGATG
GAGGTGATCC AAGTACGCGG CATACGTCGC TCGATTGAAG CCTCATTGAA TACCAAACGC
TTCGCCGACT CCACGGTCGA TGCCATCACC TCGGAAGACA TAGGTAAGTT TCCCGATAAA
AACATCGGTG ATGCGCTGCA GCGAATTTCT GGGGTCACGG TCGATAGGCA ATACGGCGAA
GTAAGCGGCG TCACTATTCG CGGTACAGCG CCAGAGCAGA GCCGTATTTT GCTTAACGGT
CAAACCGTTG CTAGCACTTC TTGGTATGAC CTTGGTCCCG CAACGCGGAC CTTCAACATG
GAATTATTGT CAGCCGAGCA AGTGAGTGCG GTTGAAGTGC ACAAAACCCC GACCGCGAGA
CTTGAAGAAG GTGCGCTGGG CGGCACTGTC GATCTCAAAA CCCGCAAGCC CTTAGATCTC
GATGCCCACA CCTATCAAGT CGCTGGTGAG CTGAGCCAAA GCAGCCTGTA CGATGAAACA
GACCCGAGTG GCTCATTCCT CGGAAGCTGG AAAAATGACG ACGAAAAGTT CGGCATTTTA
GGCGCCTATT CAGTAGAAAA AATTACCAGC GGCCGCCAAG TACTGGAATC TCTCAGTGGT
TATTATGAAT ACTTCGCCGC CGATCCCGCG CAAAATCAAG AATCTACCGT TGGCGCTTGG
GGCATTGGCT CGCAGGCCTT TAGAGCGGAA CGTGAACGGA CCAGCGCCCA AGTCACACTG
CAATTTGCAC CAACTGACAA TACCGAGTTC ACCTTAGATT ACTTTAATTT TGAACTCGAT
ATCCCCCACG TAAACCATAA CTTCTTAACC GTTGGCGCGC GCGGTTCAGG CTCCACCAAC
GTAGTGAATA ACGCCCAAGG CGGCACAGCG TCGGCAACGA TTCTGCCGGC GTATGCGTCG
ATTATTTATA ACCCTGTGGT GCGCCACGCG GTCAATATGA AATCTGACGT ACTCAACTTA
ACCGGAAAAT ACGTCGGAGA CAGTTTTACG TTGAGCGGTG TCATCGGCCA ATCGACCTCA
GATGGCGGCA CCCAAGGCGG TTCATCTTCT TGGTGGATCC CAGCGACGGA TCAAGGCGGT
AAAATTGGCG ACCCCGCCTT CCCTAATGGT CAAGGCAGTG TCGATGGCGG CTTTAGTTAC
GATGCCACGG GTCCCTACCA AGTGGTGCTG ACGAGTTTAG ATGCCAACGA TGCCAGCCAA
TTCAAGCACG CCCAAGAGGC GAACTACGAA ACCACAGTGC AAGATCATAA AGTGACCTAC
GCACAGTCCG ATTTCGAATA TCAACTCGAC CATGATTTTA TTAACAAAAT TGCGGTCGGG
ATTAAGTACA ACACCAGTGA TTTCGAGCGT AATGCCTTCA ACCGTAACCC CGCAGAAATC
CTAGGTTTCG TGCCTAATGG CAACCTAGCC AACTGGAGCG ATGGCGTGCT GTCTGGGCTA
CATTCCCAGA GCGGCGGCAA TGTGCTCGAC TCCTATGCCA AGTTAGATGA AGACAAATGG
TGGGCCTTTA TCAGCGAGAA ATACGCCAAT GGCGAGTTAG TGGAAGTCGC CGATCTCGGT
AACACCTTCA CTGTCGAAGA GGATATGTTG GCCCTGTACG CCCAAGCGGA TTTCAGCGGC
GAATTCTACC GTGGTAACTT TGGCGTGCGT TACGTTAACA CAGACCAAAC CTCAACCGGT
TTTGCCGATG GCAAGCCCTA CAATGAATCC GTCAATTACG ATAATTGGCT ACCGAGCATC
AACGTCGCCT TTGATCTGCA AGAAGACTTA ATCCTACGTG CTTCGGCCTC TTCCGTGATG
GCACGTAACA ATTACAGCGA TCTTAAACCT GGCTTAGCCA TAGCAAAAAA CTTTGGTACT
GCGACCGGCG GTAATCCAAA TTTGAAACCC TATAAGGCGA ATCAAGCCGA CCTTGGCATC
GAATGGTACT TCACTGAATC TTCTATGTTG TCGGCGGCCT TGTTCTACAA AGATATTGAT
AACGTAGTGT TTGTCACTGA GTCGACGCAA TATATCGAAG GTTGCGGCGC GTCAGAATCT
GAGTGGGATA AATGCCGAGT CACAGCCCCT GCCAACGGCG GTAGCGGCTC AGTGACTGGG
CTTGAAATCC AGCTGCAACA TAACTTTGAA AGCGGTTTTG GCTTCTTGAC CAACTACACC
TATGTTGACA GTAAAAGCAC TCGCCCCGAT GGCACTGAAC AGATGATTGA AGGCGTATCA
GAAAACTCCT TCAACGGCTC ACTCTTCTAC GAAGATGATC TATTCAGCGC CCGTATCGCC
TATAACTGGC GTTCAGAATA CTTAGGCGTG GGTAACATTC AAAACGTGTT AAACGACAGC
TATCAACAAG TCGATGCCTC GATTATTTGG CATGCGATGG AGAACTTAGA TGTTTCACTC
GAAGGGGTTA ACTTAACCAA TGAAGTGGTG CAATCCTATG ATGTTAAATA CGGATTGACC
CAAAATACCA TCGAATTTGG TTCACGTTAT TTCGTCGGTG CCAGCTACAA ATTTTAA
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| Protein sequence | MSEGQLFKSS LLALCIANAL FGMSSTAVAA EQQEATAEKM EVIQVRGIRR SIEASLNTKR
FADSTVDAIT SEDIGKFPDK NIGDALQRIS GVTVDRQYGE VSGVTIRGTA PEQSRILLNG
QTVASTSWYD LGPATRTFNM ELLSAEQVSA VEVHKTPTAR LEEGALGGTV DLKTRKPLDL
DAHTYQVAGE LSQSSLYDET DPSGSFLGSW KNDDEKFGIL GAYSVEKITS GRQVLESLSG
YYEYFAADPA QNQESTVGAW GIGSQAFRAE RERTSAQVTL QFAPTDNTEF TLDYFNFELD
IPHVNHNFLT VGARGSGSTN VVNNAQGGTA SATILPAYAS IIYNPVVRHA VNMKSDVLNL
TGKYVGDSFT LSGVIGQSTS DGGTQGGSSS WWIPATDQGG KIGDPAFPNG QGSVDGGFSY
DATGPYQVVL TSLDANDASQ FKHAQEANYE TTVQDHKVTY AQSDFEYQLD HDFINKIAVG
IKYNTSDFER NAFNRNPAEI LGFVPNGNLA NWSDGVLSGL HSQSGGNVLD SYAKLDEDKW
WAFISEKYAN GELVEVADLG NTFTVEEDML ALYAQADFSG EFYRGNFGVR YVNTDQTSTG
FADGKPYNES VNYDNWLPSI NVAFDLQEDL ILRASASSVM ARNNYSDLKP GLAIAKNFGT
ATGGNPNLKP YKANQADLGI EWYFTESSML SAALFYKDID NVVFVTESTQ YIEGCGASES
EWDKCRVTAP ANGGSGSVTG LEIQLQHNFE SGFGFLTNYT YVDSKSTRPD GTEQMIEGVS
ENSFNGSLFY EDDLFSARIA YNWRSEYLGV GNIQNVLNDS YQQVDASIIW HAMENLDVSL
EGVNLTNEVV QSYDVKYGLT QNTIEFGSRY FVGASYKF
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