Gene Shew185_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1147 
Symbol 
ID5373701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1366765 
End bp1367919 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content48% 
IMG OID640829346 
Producthypothetical protein 
Protein accessionYP_001365362 
Protein GI152999681 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.076201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACGA CACAGACAAA CGCAATTGCG CCAGTAAAGG TGAATAAACC TAGGTTGATG 
TCGCTGGATG CACTACGTGG CTTTGATATG TTTTGGATTT TGGGCGGTGA GGCTTTGTTT
GGTGGCTTGC TTATTCTAAC AGGCTGGGCT GGTTGGCAAT GGGGCGATGA ACAGATGCAC
CATAGCCAAT GGCACGGCTT TCGGTTTTAC GATTTAATCT TTCCGCTGTT TATTTTCCTC
TCTGGTGTGG CCTTAGGTTT ATCCCCCAAA CGTTTAGATA AATTACCCAT GAGTGAGCGA
TTACCTGTGT ATCGTCACGG GATTAAACGA CTCTTTTTAT TGCTATTACT GGGCATTTTA
TACAATCACG GTTGGGGTAC AGGCGCGCCT GCCGATCCTG AAAAAATTCG CTATGCCAGT
GTGTTAGGTC GAATCGCCTT TGCATGGTTC TTTGCCGCAT TATTGGTGTG GCACACGAGT
CTACGAACCC AAATTATCGT CGCCTTGGGC ATTTTGCTCG GTTATGGCGC AATGCAACTT
TGGTTGCCTT TCCCTGGTGG ACAGGCCGGC GTGCTCTCGC CAACGGAATC CATCAATGCC
TATGTCGATT CGATTTTATT ACCCGGCGTG AGCTATCAGG GACGCACGCC CGATCCTGAA
GGTTTACTGT CGACTATTCC CGCCATCGTC AATGCGTTAA CGGGTGTGTT TGTCGGCCAC
TTTATTGTTA AATCCCATCC TAAAGGAGAG TGGGCCAAAG TGGGATTGCT CGCCGCTGCG
GGTGGCATTT TGTTAGCCTT CGGTTGGCTG TTAGATCTTG TTATTCCGGT CAATAAAGAG
CTGTGGACCA GTTCATTTGT GCTGGTGACG TCGGGCTGGA GCATGATACT GCTGGCGGTA
TTCTATGCCT TAGTCGATGT GCTTAAGTGG CAAAAATCCG CATTTTTCTT CGTGGTGATA
GGCACCAACG CCATCATTAT TTACTTAGCG TCGAGCTTAG TGGATTGGAA ATATATCGCT
CAAAGCGTGT TTGGTGGCTT AGTGCTGGCC TTGCCTGAAA GCGCTCAAGC GTTAGCTGCG
GTTATCAGCT TGCTCGCGGT GCAGTGGCTG GTTTTATATT GGATGTATCG CCGCAATATT
TTTGTCAGAA TTTAG
 
Protein sequence
MGTTQTNAIA PVKVNKPRLM SLDALRGFDM FWILGGEALF GGLLILTGWA GWQWGDEQMH 
HSQWHGFRFY DLIFPLFIFL SGVALGLSPK RLDKLPMSER LPVYRHGIKR LFLLLLLGIL
YNHGWGTGAP ADPEKIRYAS VLGRIAFAWF FAALLVWHTS LRTQIIVALG ILLGYGAMQL
WLPFPGGQAG VLSPTESINA YVDSILLPGV SYQGRTPDPE GLLSTIPAIV NALTGVFVGH
FIVKSHPKGE WAKVGLLAAA GGILLAFGWL LDLVIPVNKE LWTSSFVLVT SGWSMILLAV
FYALVDVLKW QKSAFFFVVI GTNAIIIYLA SSLVDWKYIA QSVFGGLVLA LPESAQALAA
VISLLAVQWL VLYWMYRRNI FVRI