Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0553 |
Symbol | |
ID | 5369706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 635280 |
End bp | 636434 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640828758 |
Product | peptidase M28 |
Protein accession | YP_001364784 |
Protein GI | 152999103 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAATA GCACTCAGTC CCCAGTGACT CACCTTATGT TACCGAGGCA GTATCAATCA CTTTTAAGTA AAAACCTAAG CGACATAAAC CTAAGCCCAT CGACTCTATT CAACCACAGT CGTATAGGTC AGCGGCTCGC CAAGTTCCAA ATCCCACGTC CTATAAAACA TCAATCCCAA CGATTTGGCA TATTCGCACT GGCCTGCTTT GTGGCAGTCA CTCTCAGCGG CTGCGCTAAC TCACTGGAAA CCTGTGCGCG CACTGAGCTT AAACTCACTT GGGCCGAGCC AGCAGAGTTA CAAGCGACAG TGACAATATT AAGCTCAGAT GAATTTGAAG GCCGCAAAAC CCAGACGCAA GGTGCAGCAA AAAGTCGTGA CTATATAAAG CAGCAATTTG AAGATCTCAA TTTACAGCCT TGGGGAGCGG ACTTTATCGT GCCCTTTGAA TACCAAACCT TCTTCACCCA AGAAACCGGC GCCAATGTGG TCGCCACCGC CATGGCGACA GAGCCGACGA ATCGATGGCG CATTATCGTT GCCCACTATG ATCACTTAGG CATGAGCGGC AGCAAGATTT ACCACGGCGC CGATGATAAC GCCTCGGGCG TCGCCGCTAT GCTGGCAATT GCCAAACATT GGCAGCAGCA ATTTGCCCTG CAACCCAATA CCTTGCCTAA GGTGAATCTA ATGTTTGTGG CAACCGATGC CGAAGAACCG GGACTCTATG GCAGCATCGC CTTGGTCGAA CAACTCAAAA CCCGCCTGCC GGAGGCGACA TTTGAATTAA TGATTAACCT CGACATGGTG AGTCACCCCA GCAGACCCTA TGGGATTTAC CTTGAAGGCA GCCGAAACTT CACTCAGTTC AATCAATTTA AACCCCTACT CAATCAACAA AACCGACTGT GCATTAAGCT CACGCACCCA AAACCCGTTG GCCGTAGCAT ACAAAGTACC GACTGGCTGC GGGCATCGGA TCATTATCCC TTCCACAAAG CCAATATCCC TTGGCTGTAT TTTGGCGTGC CGACCCATCC CCAATATCAC ACCCCTGAGG ATACCGTCGC GACAATCGAC ATCACTTTTC TGGCGGCCGT GACTGAGTCA GCATTTGAGC TACTTCAATT AAATGCCGAA TATTTAAAGA ATTAA
|
Protein sequence | MRNSTQSPVT HLMLPRQYQS LLSKNLSDIN LSPSTLFNHS RIGQRLAKFQ IPRPIKHQSQ RFGIFALACF VAVTLSGCAN SLETCARTEL KLTWAEPAEL QATVTILSSD EFEGRKTQTQ GAAKSRDYIK QQFEDLNLQP WGADFIVPFE YQTFFTQETG ANVVATAMAT EPTNRWRIIV AHYDHLGMSG SKIYHGADDN ASGVAAMLAI AKHWQQQFAL QPNTLPKVNL MFVATDAEEP GLYGSIALVE QLKTRLPEAT FELMINLDMV SHPSRPYGIY LEGSRNFTQF NQFKPLLNQQ NRLCIKLTHP KPVGRSIQST DWLRASDHYP FHKANIPWLY FGVPTHPQYH TPEDTVATID ITFLAAVTES AFELLQLNAE YLKN
|
| |