| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0486 |
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| Symbol | |
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| ID | 5371054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 550568 |
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| End bp | 551905 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640828691 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001364717 |
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| Protein GI | 152999036 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGA TCAACAAGAT GTTGCAGGAT CTCGACAAAC GTCAGCAGGG GCACGAACTT
AGTAACGTCA CTCAACCGCA GGTGCAATAT TTAGCTCGCA GGCGTTCATC ATCTCACTGG
CTGCTGCTCT GTGGTTTTTC ACTGCTATTC GGTGGCGGCA CGGTTTATGG CTGGCAATTT
TTCATGGCAG AGCCTGCAGA AGCGACAGCT TCATCTCAAG CGCAGGAACA AGATACTTTA
ACCGCCCAAA CTGAGTCTGT GCGGATCGAC AGTGTTGCCT CAGAAGAAGC TTCACCTAAC
GTCGATGCCG CTGCAGAACC CTTGAAGCTT GCGACGGCGA TGACAGCGAA TAGTGAAGAG
TTTGAACCAA GTGCCACCGA AGTGGCATCG AGTCAGGCAC CAGAATTAGG AACCGCAAAA
GAAGCTGAGC ATGAGCAACA AGCTCAGTCT CAGTCGCAAC CACAACAAAA ACCACAAGCA
GACGTGAGCC TTGCACTCGC AAATGATCAG GTTGATACGG TAAGCGAGCC AAGCCACTCG
CAGCCAAGCC ATTCACAGCC AAGTAGTGCG ACATCGAGTG TGCGTAGCGC CGAGGTCACT
GTAGCTGCAC CCTCTGCGTT AATGATGTCG GAGCGGGCCA GTGTTGCCGC CGATAATGAA
GGTAATGCGA GCAATGGGCT TAACGACGCT GATGCAGGCA CTAATCGACT CGCGCCCAAA
GAACAAGGGC AAATGGCGAT TACTGAGGTG AAGTTAACGC CAAAGCAGCT GGCAAAGAAG
CGGTTTACGT TAGCGAGTGA GGCAGAAAGG GATGGCAAGC TCAAAGATGC CATTAGTTAT
TATGAGCAAA CCTTGGCGCT TGAACCCAGC ATGCACGAAG CGCGCAAGCA ATTAGCTGCA
CTGCATTATG GCCAAGGTCA ATTAGCCAAA GCCAGTGAAG TGTTGCAGCA AGGCATGCTG
TTATTCCCGC AGCAGTTAGA CTTTGCCTTA TTGCTCGCTC GGGTTCAGCA AGCCGCTGGT
CAGGCTGATC TCGCATTAGT GACGTTAGCT AACATACCTG ATACGCATCC GCTGGCGAGA
CAAAAGTGGA TGGCACAATC GGATCTGGCG CAAAAGCTAG GGCAGTTTTC CGTTTCGGAA
CAAGCCTACA GGCAGTTATT ACAACAAGAA CCCCAACAGG CTAAATGGTG GATGGGACTA
GCTTATGCGC TTGATTCGCA GCAGCAATTT ACCCAAGCAC GCCAAGCCTA TCGGACTGCA
TTAGGCCACA GAGGCTTATC GGCGCAGGCG AGTGCCTTTA TCGAACAACG TTTGACTCAG
CTAGGAGATA GCCAATGA
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| Protein sequence | MSVINKMLQD LDKRQQGHEL SNVTQPQVQY LARRRSSSHW LLLCGFSLLF GGGTVYGWQF
FMAEPAEATA SSQAQEQDTL TAQTESVRID SVASEEASPN VDAAAEPLKL ATAMTANSEE
FEPSATEVAS SQAPELGTAK EAEHEQQAQS QSQPQQKPQA DVSLALANDQ VDTVSEPSHS
QPSHSQPSSA TSSVRSAEVT VAAPSALMMS ERASVAADNE GNASNGLNDA DAGTNRLAPK
EQGQMAITEV KLTPKQLAKK RFTLASEAER DGKLKDAISY YEQTLALEPS MHEARKQLAA
LHYGQGQLAK ASEVLQQGML LFPQQLDFAL LLARVQQAAG QADLALVTLA NIPDTHPLAR
QKWMAQSDLA QKLGQFSVSE QAYRQLLQQE PQQAKWWMGL AYALDSQQQF TQARQAYRTA
LGHRGLSAQA SAFIEQRLTQ LGDSQ
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