Gene Shew185_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0297 
Symbol 
ID5373318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp336994 
End bp337605 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content49% 
IMG OID640828498 
ProductTetR family transcriptional regulator 
Protein accessionYP_001364531 
Protein GI152998850 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACA AACCCATTAA ATTGACAAAT TCTCAGCAGA AACGTGTGGC GATTCTGCGT 
GCCTCGCGGG AAGAGTTTAT GGTCAATGGC TTTGTGGGTG CCAGTATGGA CAGGATCGCC 
CTGCGGGCTA ATGTCTCTAA ACGTACTGTG TATAACCATT TTCCGAGCAA GGAAGTGCTG 
TTTGATACCA CAACCACAGA GTTGTGGGCG CGGACGAAAG AAGCGGCGAC CTTGGTTTAC 
AATCCGGCGA AGAGTCTTGA AGATCAGTTG CAGCAAATTG CGCATCGATG CTGGGCTTTG 
TATCAGCAGC CTGAGTTTCT CGATGTGGCG CGGGTGGTGA TGGCAGAGTT TATTCGCTCG 
CCTGTCCAAG CGACTGAAGC GATGGAGAAG CTCGCGAAGC AAGAAGGTGG ACTCGAAGCT 
TGGCTTGCGG GAGCGGTAGA ACACAAGGCG CTGAATATCG AAGATATTGT AATGGCATCG 
ACTCAGTTTT GGGGCATGTT TAAGGCGTTT GCATTCTGGC CTAAGTTGTT CCATATGAAA 
AATAATGATG AGCACCAGCA AGCGATTATC GACGCCAATA TCAAGATGTT TTTAGCCATG 
TATCGCGCTT AA
 
Protein sequence
MADKPIKLTN SQQKRVAILR ASREEFMVNG FVGASMDRIA LRANVSKRTV YNHFPSKEVL 
FDTTTTELWA RTKEAATLVY NPAKSLEDQL QQIAHRCWAL YQQPEFLDVA RVVMAEFIRS 
PVQATEAMEK LAKQEGGLEA WLAGAVEHKA LNIEDIVMAS TQFWGMFKAF AFWPKLFHMK 
NNDEHQQAII DANIKMFLAM YRA