| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0158 |
|---|
| Symbol | |
|---|
| ID | 5371644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 187349 |
|---|
| End bp | 187825 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640828346 |
|---|
| Product | general secretion pathway M protein |
|---|
| Protein accession | YP_001364392 |
|---|
| Protein GI | 152998711 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3149] Type II secretory pathway, component PulM |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATT TGCGGACTTG GTGGCAAGGG CTCGCATCGC GCGAGCAGCA GTTAGTCGGT
TTTGGTTCGG TATTCTTAGT CATAGGTATT TTTTATTGGG GTGTTTGGAC GCCAATCGCC
ACTGCCGAAG CCGATGCATT ACGTAACTTC ACTGTGCAGC AACAGACGTT GAACCATGTA
AAACAAACGG CGAATAAAAT TGCGAGTTTG AAGCAGAATG GTACTAAACC GACTATGTCG
GGCAGTTTAA GCTCAGTGGT TAACCAAACT GCGGGCAATT ATGGGTTAGT GATTACTCGC
ATGCAGCCCC AAGGCGATAA GATCCAAGTG TGGATGGACG ATGTTCCTTT TGATGCCTTG
TTAGGTTATT TGAGTGAGTT AGTGCAGAAA AAAGGACTTT CACTCGAAAG TGTTGATTTG
GCAGAGGCCG ATGCCCCTGG CTATGTCAAA GTTAGACGTA TCCAACTGTC GCAATAA
|
|---|
| Protein sequence | MDNLRTWWQG LASREQQLVG FGSVFLVIGI FYWGVWTPIA TAEADALRNF TVQQQTLNHV
KQTANKIASL KQNGTKPTMS GSLSSVVNQT AGNYGLVITR MQPQGDKIQV WMDDVPFDAL
LGYLSELVQK KGLSLESVDL AEADAPGYVK VRRIQLSQ
|
|---|
| |