Gene Shew185_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0144 
Symbol 
ID5370825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp171925 
End bp173175 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content50% 
IMG OID640828332 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001364378 
Protein GI152998697 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGCA AGAGTTTATT AGGCAATATT GGTGTGCAAG TGGTTATTGC CATGATTATC 
GGCGCGCTAG TCGGTTTTAT CATGGGCGAG AGTGCAAGCG TGTTTGCACC ACTCGGAACC
ATTTTTATCC ATTTAATCAA AATGCTAGTG ATCCCACTAG TGTTAGTTTC TATCATCAGC
GGCGCGGCGA GCTTAGGCGA TAGCCCATCG GCGGGTAAGA TTGGCATCGG CACTTTCGGC
TTCTTTATCG TGACATCTGG CATCGCCGTG GTGCTGGCGT TGGTGATGGG CAATCTGTTT
CAACCGGGCG CGGGTGTTGA TTTCACAGCC CACAGCAGCT CAGATTTGAT GGAAGTAACC
AAGGAACACG GCGCATTGCC TGGGGTGATG GATACCTTTA TCGGTATGAT CCCAACCAAT
GTGTTCGAAT CGCTGAACGG CGGTAACATC TTACAAATCT TAGTCTTTAG TATCTTTTTT
GGTATCGCGC TGACTAAGGT TAAAGGCGAT GGCGCTAAGC CTATTTTGGC TGCACTCAAC
ACTGTCGTCG ATGCCTTTGT GTGGATGATC AACTGCGTGA TGATCATTGC GCCTATCGGT
GTATTTGGTT TGATGGCCGA TTCCGTGGGC ACCTTCGGTT TCGATGCGTT AGAAGTGGTA
TTTAAGTTAT TCGCCGTGTT TGTGGCCGCG ATTCTGATCT ACGGTTTTAT CTTCTTCCCA
TTGGTGGTGC AGCTCTTCTC AAGAGTGTCG GCGCGCCAGT TTATTTCGGC AATGAAGAAA
CCACAGGTGA TGGCGTTATC GACCGCCTCG TCAATGGCGA CGCTGCCGGT GAATATGGAA
ACCTGCGAGG AAGATCTTAA AGTCTCTAAG GCAACCACAG CCTTCGTGCT GCCGTTAGGC
GCCACGATCA ATATGAGCGG CAACGCGATT TATTATGGTT TAGTGGCCAT GTTCTTCGCT
CAAATGTATA ACGTCGACCT GTCGATGACG GCCTATGCGG CCATTATCTT CACCTCAACC
TTAGGCGCAA TTGGTCAAGC GGGTGTGCCC GGTCCGTCTT TCTTAGTGGT GGCAGTGCTG
TTAGCGGCTG GCATCCCTAT CGATGGCTTA CCTTTGCTGT TTGCCTTAGA CCGAGTGTTT
GACATGATCC GCACCGCACT TAATATCACT GGCGATGCGG CTTGTGCCTT GATCATGGAT
AAGTACACAG AAGTTGACGT TAAAGCGGAT AGCGAGCGCA GCTTAAGCTA G
 
Protein sequence
MKSKSLLGNI GVQVVIAMII GALVGFIMGE SASVFAPLGT IFIHLIKMLV IPLVLVSIIS 
GAASLGDSPS AGKIGIGTFG FFIVTSGIAV VLALVMGNLF QPGAGVDFTA HSSSDLMEVT
KEHGALPGVM DTFIGMIPTN VFESLNGGNI LQILVFSIFF GIALTKVKGD GAKPILAALN
TVVDAFVWMI NCVMIIAPIG VFGLMADSVG TFGFDALEVV FKLFAVFVAA ILIYGFIFFP
LVVQLFSRVS ARQFISAMKK PQVMALSTAS SMATLPVNME TCEEDLKVSK ATTAFVLPLG
ATINMSGNAI YYGLVAMFFA QMYNVDLSMT AYAAIIFTST LGAIGQAGVP GPSFLVVAVL
LAAGIPIDGL PLLFALDRVF DMIRTALNIT GDAACALIMD KYTEVDVKAD SERSLS