| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4253 |
|---|
| Symbol | |
|---|
| ID | 5335018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2630828 |
|---|
| End bp | 2632582 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | putative NHL repeat protein |
|---|
| Protein accession | YP_001363980 |
|---|
| Protein GI | 152968196 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.376441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.79365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAACG GGGTTCCGCG GCAGGATCGC GGCGTGAGTC GCGTGCGGGC CCCCCGTCTC
GTCGGGCGCT GGGTCGGGCC CGCCCCGGAC CTCGCGGGCG TCCCGGTGCT GCTGGACTTC
TGGACGGGGT CCTGCGTGAA CTGCGTCCAC GTCCTGGCCG AGCTGCGCGA GCACGTGCCC
CCCGGCCTGC TCGTCGTCGG CGTCCACTCG CCCAAGTTCC CGCACGAGGC CTCCCCCGGG
GCCGTCGAGG CGGCCGTCGC CCGGCTCGAG GTCGACCACC CCGTCCTCGA CGACGCCGAC
CGCACCACCT GGTCCGCCTA CGCCGTGAAG GCGTGGCCGA CGCTCGTCCT CGTCGACGCC
GGCGGCTACG TCGTGGCGAC CCGGTCGGGG GAGGGGCACG TCGCCGAGCT CGTCGCCCTC
GCCGCGGACC TGCCCGCCCG CCCCGCCCCG CCGGCCGCCG TCCCCGCCGG CGACGGGCCG
CTGCGCTTCC CCGCCCGCCT CGCCCGCACC GCGGCGGGGG AGCTCCTCGT CGTCGACGCC
GGGCACCACC GCCTCCTCGT CGGGGACCGC CCGATCGGTT CCGGCGCCCG CGGTCGCACC
GACGGCCCCG CCCCGTCCTT CGCCGCCCCG CAGGGGGTCG CGGTCCTGCC CCCGGACCTC
GCGGCCGCGC TGGGGTACGA CCTCGTCGTC GCCGACACGG GCAACCACCT GCTGCGCGGG
GTCCGCTCCG CCGACGGCCG CACCACGACG ATCGCCGGGA CCGGCGCCCC CGCCCGCGGG
CGCAGCGGCG GTGGCCCCGC CCTCGCCACC GCCCTCTCCA GCCCCTGGGA CGTCGCGTGG
TGGCCCGCGT TCGGGGAGCT CCTCGTCGCC GTGGCCGGGA CGCACCAGCT GTGGGCGTTC
GACCCCGTCG CCGCCACGGT GCGGGTGGTC GCCGGCACCA CCGCCGAGGG GCTGCTCGAC
GGGCCGGCCG AGCGGGCGTG GCTGGCGCAG CCCTCGGGCC TGGCCGTCGA CGGGGATCGG
CTGTGGTTCG TCGACGCCGA GACCTCCAGC CTGCGCTCGC TGCGGTTCCC CGGCGACCCC
GCGCGCCTGG ACCGCTCCGT CCCGCGCACC GACGACCCCC GGATGGCCAA CGTCGACCCC
GTCGCCCGCC CCGGGGGGAT CGTGGAGACG GCCGTGGGGG AGGGGTTGTT CGAGTTCGGG
GCGCAGGACG GCGAGGCCGC CGGGGCCCGG TTCCAGCACC CCCTGGGCCT GGCCGTCGAC
GGCGGGACGG TGCTCGTCGC GGACAGCTTC AACGGCTCGC TGCGCCGCTA CGACCCCGTC
GCCGGCACCG TCGAGACCCT GCTCGACGGT CTGGCCGAAC CCGTCGACGT GCTGCGCGAG
GGCGAGGACC TGCTCGTCGT GGAGTCCGCC GCGCACCGCG TCGGCCGCTG GCGGGTGCCG
GTCCCGGACC GCCGGGTGCT GCCCGCGGCG CGGGTGCGCC CGGGCGCGGT CCTGCGCGTG
GAGTTCACCC CGCGGCCCGG CCGCCACGTC GACGACCGCT GGGGCAGCCC GTACCGGGTG
CAGGTCCAGG GTGAAGCGGG GGAGGACCTC GTGCGCCCGC TGCCGGTGCC GGACGCGGAG
GTGCTGCGCG TCGTCGTGCG GGTCGCGACC TGCGACGACG CGGCGGGGAC GTGCGCGCTG
GAGGAGTTCA CCCGGCTGGT GCCGCTGACC GGCGCCGGGG ACGGGGAGGC GGAACTGGTG
CTCCACCTCC CCTGA
|
|---|
| Protein sequence | MRNGVPRQDR GVSRVRAPRL VGRWVGPAPD LAGVPVLLDF WTGSCVNCVH VLAELREHVP
PGLLVVGVHS PKFPHEASPG AVEAAVARLE VDHPVLDDAD RTTWSAYAVK AWPTLVLVDA
GGYVVATRSG EGHVAELVAL AADLPARPAP PAAVPAGDGP LRFPARLART AAGELLVVDA
GHHRLLVGDR PIGSGARGRT DGPAPSFAAP QGVAVLPPDL AAALGYDLVV ADTGNHLLRG
VRSADGRTTT IAGTGAPARG RSGGGPALAT ALSSPWDVAW WPAFGELLVA VAGTHQLWAF
DPVAATVRVV AGTTAEGLLD GPAERAWLAQ PSGLAVDGDR LWFVDAETSS LRSLRFPGDP
ARLDRSVPRT DDPRMANVDP VARPGGIVET AVGEGLFEFG AQDGEAAGAR FQHPLGLAVD
GGTVLVADSF NGSLRRYDPV AGTVETLLDG LAEPVDVLRE GEDLLVVESA AHRVGRWRVP
VPDRRVLPAA RVRPGAVLRV EFTPRPGRHV DDRWGSPYRV QVQGEAGEDL VRPLPVPDAE
VLRVVVRVAT CDDAAGTCAL EEFTRLVPLT GAGDGEAELV LHLP
|
|---|
| |