Gene Krad_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3887 
Symbol 
ID5335318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3011886 
End bp3013895 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content72% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_001363614 
Protein GI152967830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00718752 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACGG TCACGCACGG CAACGAACTG CACCTGGAGG CCTCCGGGGG CCTGGCCCCC 
GACGACGGGG TGTGGCGCGA GGTGCACCGC ATCGTCTTCC CCTCGCGCGC CGACATCGAC
GTCCTGCCGC TGTACGTGGA CTTCTCCCAG TCCGAGGGCT ACGCCTCGGC GGAGTCCGAC
AGCATGGAGT TCGTCAACAC CGGCACCGGG GAGTCCGACA CCGAGGCCGC CGGCGACCGC
CGCAGCCTCA CCGTCCCCGC CGGCAAGCGG TACTCGCTGG GGTCGTACTT CAACGCCTTC
CCGGCCAGCT ACTGGCGCCG CTGGACCCGC GCCGAGAAGA TCCGCTTCAG CGGCACCTTC
CTCGGCTACG GCACGGTGAC GCTGTTCAAG TCCAACGCGC GCGGCTCGCG CCAGCGCGTC
ACCTCCTGGC GCGTCGACGG CGAGGCGCAG CTGACCGAGG AGCTCACCCT CGCCCCCTTC
GCCGACGGCG GCTGGTACTG GATCGACGTC GCCGGCGGCT CCGAGGCCCT GACCCTGGTC
GAGGCCGCCT GGAGCGCGCC CGTCGCCGAC CAGCCCGCGG GCAAGGCCTC CATCGGCGTC
ACCACGTTCA ACCGCCCCGA CTACTGCGTC AAGACGCTCA ACGCGCTGGC CGCGGACGCG
TCGGTGCTCG AGGTCCTCGA CGAGATCGTC ATCGTCGACC AGGGCACCCA GAAGGTCCGC
GACGAGGACG GCTTCGCGGA GGTCGAGGCC CTGCTCGGCG CGAAGCTGCG CATCATCGAG
CAGCCCAACC TCGGCGGCTC CGGCGGTTTC GCCCGCGGCA TGTTCGAGGC CGTGCGCGGG
GAGCGGAGCA AGTACGTCCT GCTCCTCGAC GACGACGTGA ACATCGAGCC CGAGGGCATC
GTCCGCGCGG TCCAGTTCGG CGACGCGTGC CGCAAGCCGA CCCTCGTCGG CGGGCACATG
TTCGACATGT ACGACCGCTC GGTGCTGCAC ACCCTGGGCG AGGCGGTGAA CCTCTACCGG
TTCTTCTGGG GCCCCGCGCG CGGGCTGTAC CACGGCCACA ACCTCGCCGC CTCGAACCTG
CGCCAGACGC CGTGGATGCA CCGCCGCGTC GACACCGACT ACAACGGCTG GTGGATGTGC
CTCATCCCCG TCGAGGTCGT CAAGGAGATC GGGCTCTCGC TGCCGGCGTT CATCAAGTGG
GACGACGCCG AGTACGGCCT GCGGGCCATG GAGCACGGCT ACTCCACGGT GTCGCTGCCC
GGCGCCTGCG TCTGGCACGT GTCCTGGAAC GACAAGGACG ACACGATCGA CTGGCAGGCG
TACTACCACG AGCGCAACCG CTTCCTGGTG GCCCTGCTGT ACTCGCCCTA CGAGCGCGGC
GGGCGGCTGT TCCGCGAGAG CAGCTACACC GACGTCAAGC ACCTCATCTC GATGCAGTAC
TACGCGCAGG CCCTGCGCAA CCGCGCGCTG ACCGACCTCC TCAAGGGGCC GGAGCACCTG
CACGAGCTGC TCGGCGCGAC CCTGCCGGCC GTCCGCGCGC TGCGCGCGGA GTACCCCGAC
GCGCAGGTCG CGGCCGAACC CGACGCCTTC CCGACCCCCA AGCGCGGCAA GCCCGCGCAC
AAGGGCAAGG AGCCGCAGGC CCCGCGCCGG GGCATGCTGC TGCCCTGGGC GGCGCAGGCC
GCGCTGCGCC AGCTGCGCGC GCCCAAGCCC GAGGCCGCCC AGCGCCCCGA CGCCACCCTC
GCCGCCAGCG ACGGCAAGTG GTGGGAGCTG TCCCTCTACG ACAGCGCCGT GGTCTCCATG
GCCGACGGCA AGGGCGCGGT CTGGTACCGC CGCGACGCGA GGAAGTTCCG CTCGCTGCTC
GCCGAGTCCG CGGACCTGCA CCGCCGGATG CTCACGGCCT GGCCGCAGCT GCGCGCCGAG
TACAAGGCCG CGCTGCCCGA GGTGACCTCC ATGCGGGCCT GGGCCGACAC CTTCGGGGTG
GACCTCGACG CTCCCCGCGA GGGGGACTGA
 
Protein sequence
MSTVTHGNEL HLEASGGLAP DDGVWREVHR IVFPSRADID VLPLYVDFSQ SEGYASAESD 
SMEFVNTGTG ESDTEAAGDR RSLTVPAGKR YSLGSYFNAF PASYWRRWTR AEKIRFSGTF
LGYGTVTLFK SNARGSRQRV TSWRVDGEAQ LTEELTLAPF ADGGWYWIDV AGGSEALTLV
EAAWSAPVAD QPAGKASIGV TTFNRPDYCV KTLNALAADA SVLEVLDEIV IVDQGTQKVR
DEDGFAEVEA LLGAKLRIIE QPNLGGSGGF ARGMFEAVRG ERSKYVLLLD DDVNIEPEGI
VRAVQFGDAC RKPTLVGGHM FDMYDRSVLH TLGEAVNLYR FFWGPARGLY HGHNLAASNL
RQTPWMHRRV DTDYNGWWMC LIPVEVVKEI GLSLPAFIKW DDAEYGLRAM EHGYSTVSLP
GACVWHVSWN DKDDTIDWQA YYHERNRFLV ALLYSPYERG GRLFRESSYT DVKHLISMQY
YAQALRNRAL TDLLKGPEHL HELLGATLPA VRALRAEYPD AQVAAEPDAF PTPKRGKPAH
KGKEPQAPRR GMLLPWAAQA ALRQLRAPKP EAAQRPDATL AASDGKWWEL SLYDSAVVSM
ADGKGAVWYR RDARKFRSLL AESADLHRRM LTAWPQLRAE YKAALPEVTS MRAWADTFGV
DLDAPREGD