Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3872 |
Symbol | |
ID | 5334772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3031127 |
End bp | 3032053 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | Auxin Efflux Carrier |
Protein accession | YP_001363599 |
Protein GI | 152967815 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.647471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00461263 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCGGTG TCCTGACCGG GTTCACCGTC GTCGCCTGCC TCGTCCTCGT CGGCTACGTC GTGGGCCGCA CCGGGGTCCT CGGGCCCTCG GGGCAGGTGG TCCTGTCGCG GCTGGTGTTC TTCGTGGGGT CCCCGGCGCT GCTGGTGCAG ACCCTGGCCG GCGCCGACGT CCACGTGCTG CTCTCCGCGC AGCTGCTCGT CACCGGCGGC GGCGTCGCCG CCTGCGTCCT GGTGTGGGCG CTGCTGGCCC GCTACCGCTG GCGGATGCCG CGCGAGGACC TCGTCATCGG CGCGCTGGCC AGCTCCTTCG TCAACGCCGC CAACATCGGC CTGCCCGTCG CGGCCTACGT CCTGCAGGAC CTCACGGCCG TGCTGCCGGC GATGCTCCTG CAGATGGTCG TGCTCAGCCC CGTCGCGCTG GGGATCCTCG ACGTGGGCCG CCACCGCGGC GACGGCAGCC GCCGGGCCGC GGCGAAGCGG CTGCTGACCC CGCTGGTCAA CCCCGTCCTG CTCGCCAGCG CCGTCGGGGT CCTGCTCTCC GCCACCGGCT GGGACCTGCC CGCGGCGCTG GCGCAGCCGC TGGACCTGCT GGCCGGCTTC GCCATCCCCG GGGCGCTGGT GGCGTTCGGG ATGTCCCTGC ACGGGCGCGG CCTCGCCGGC TGGCGCGACC CGCGGGTCCT CACGGCCAGC GCGCTGAAGT CCGTCGTGCA GCCCTGCGTC AGCTACCTCG TGGCCCGCCT GCTCGGCCTG GACGACGCCG CGGTCTTCGC CGCCACCGTG GTCGCCGCGC TGCCCACCGC GCAGAACGTC TTCACCTACG CCGTCCGCTA CGGCGTCGGG CGCGACCTGG CCCGCGACAC CGTGCTGGTG ACGACGGTCC TGGTCGCGCC CGTCCTGGTG CTGATCAGCG TGCTGCTGCC GCACTGA
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Protein sequence | MSGVLTGFTV VACLVLVGYV VGRTGVLGPS GQVVLSRLVF FVGSPALLVQ TLAGADVHVL LSAQLLVTGG GVAACVLVWA LLARYRWRMP REDLVIGALA SSFVNAANIG LPVAAYVLQD LTAVLPAMLL QMVVLSPVAL GILDVGRHRG DGSRRAAAKR LLTPLVNPVL LASAVGVLLS ATGWDLPAAL AQPLDLLAGF AIPGALVAFG MSLHGRGLAG WRDPRVLTAS ALKSVVQPCV SYLVARLLGL DDAAVFAATV VAALPTAQNV FTYAVRYGVG RDLARDTVLV TTVLVAPVLV LISVLLPH
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