| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3747 |
|---|
| Symbol | |
|---|
| ID | 5336086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3170228 |
|---|
| End bp | 3172552 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | trehalose synthase |
|---|
| Protein accession | YP_001363474 |
|---|
| Protein GI | 152967690 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.552498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00192759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAGG TCGGCAGCAC GGTCGAGGAC GGCGCGGAGG CGTCGGTGGC GGTGGAGGCG
GCCGACGGGG TGGAGATCGC CGGGCACGAG CCCACCGAGA TCACCTACGA CGAGCAGCGG
TACGACTCCC GCCCGCGCGC CTTGCGCCGG CCCCGGCCCC AGGCGCGGCT GCGCGGCACC
GACGCGCCCC CGCGCCCCGC CGCGGGGGAG GGTCCCGCCG ACGGCAGCAA CCCCGAGTAC
GTGCGGTGGC TGCTCGTGCA GTCCATGCTC CAGGACGCAC AGAAGATCAG CCGGCAGTTC
TCCGGCCAGG CCAGCATGTG GCAGAACCCC TACGCCAAGC CCGACCCCCG CCGGGCCGTG
GACACGGCCG CGGTGTGGTT CACCGCCTAC CCGATCTCGC TGGTGACCCG CCCGGGCCGC
TCGTTCCTCG GGTCCCTGGG CGACCCGGAG CTGTGGGAGG CGTTCCAGCG CATCGGGATC
GACGCCGTGC ACACCGGCCC GGTGAAGTCC GCCGGCGGGC TCGACGGCTG GCGCCAGACC
CCCAGCGTCG ACGGCCACTT CGACCGCATC TCCACCGAGA TCGACCCGAT GTTCGGCACC
GAGGGCGAGT TCCGCCACCT GTGCGAGGTC GCCGCCGAGC ACGACGGCAG CGTCATCGAC
GACATCGTCC CCGGCCACAC CGGCAAGGGC GCGGACTTCC GCCTCGCCGA GATGGCCTTC
CAGGACTACC CCGGCATCTA CCACATGGTC GAGATCCCGC CGGAGTGCTG GAACCTGCTG
CCCGACGTCC CCCCCGGCCA CGACGCCGCG AACCTCGACG CCGCGGCCGA GGCGGCGCTC
TCCGAGCACG GCTACATCAT CGGCCAGCTC CAGCGCGTCA TCTTCTACGC GCCGGGCATC
AAGGAGACGA ACTGGTCCGC GACCCGCGAG GTCGTGGGGG TCGACGGGGT CACCCGCCGC
TGGGTCTACC TGCACTACTT CAAGCAGGGC CAGCCCTCGG TGAACTGGCT CGACCCCTCC
TTCGCGGGGA TGAAGCTCGT CATCGGCGAC GCCCTGCACT CCCTGGGCGA CCTCGGGACC
AGCGCGCTGC GCCTGGACGC CAACGGCTTC CTCGGGGTGG AGAAGAGCGT CGAGGGTCCC
GCGTGGTCGG AGGGGCACCC GCTCTCCGAG GCCGCCAACC ACCTCATCGC CGGGATGGTC
CGCAAGGTCG GGGGGTTCAC CTTCCAGGAG CTGAACCTCA CCATCGAGGA CATCCGCGAC
ACCTCCGAGG TCGGCGCGGA CCTCTCCTAC GACTTCATCA CCCGCCCCGG CTGCCAGCAC
GCCGTCGCGA CGGGGGACAC CGAGTTCCTG CGCCTGTGCC TGCGCGAGGC CCTCAGCCTC
GGCGTCGACC CGGCCTCGCT CGTGCACGCC CTGCAGAACC ACGACGAGCT CACCTACGAG
CTCGTCCACT GGGCGACCCG CCACGCCGAG GACGAGTACG ACTACCACGG CGCGAGAATC
ACCGGCGGTG CGCTGGCCGA GCGGATCCGC GCCGACCTCG TCGAGAAGCT GACGGGCGAG
AACGGCCCGT ACAACCTCGT CTTCACCACC AACGGGATCG CCTGCACCAG CGCCAGCGTC
ATCGCCGCCA GCCGCGGGCA CCGCGACCTC GCCGAGCTCA CCGGCGAGGA CGTCGAGCAG
ATCAAGCGGG CGCACCTGCT GATGGCGATG TTCAACGCCT GGCAGCCCGG GGTGTTCGCG
ATGTCCGGCT GGGACCTCCT GGGCATGCTG CCGCTGCCGG TGGAGAGCGT GAAGCCGCTG
CTGTCCTCCG GGGACACCCG CTGGATCGAG CGCGCGGCCC ACGACCTCAT GGGCGTGGCC
CCCGAGGCGA CGGTCTCGGC CTCCGGCGTG CCCGTCGGCC GCTCGCTCTA CGGGACCATC
CCCGAGCAGC TCGCCGACGA GGGCTCCTTC GCCAACCGGC TGAGCGAGGT CCTCACCGTC
CGCCGCGACC ACAAGATCGC CACCGCCCGC CAGATCGACA TCCCGCCCGT GGCGCACCCG
AGCATGCTCG TCATGGTCCA CGCCCTCGAC CCCGCCGACC ACGACGGCCG GGAGGTCCTC
CAGGTGACGG TCCTGAACTT CGGGGCCGAG ACCATCGAGG GCTCGGTGCG CTCGGAGCAC
TTCACCCCGC GGGTCCCGGT CCGCGACATG ACCTCCGGCG CCGAGATCGG CTGGGTCGAC
GACCTCAAGA GCTTCGGGGT GTGGCTCGCG CCCTACGCGG GGCTGTCGCT GCTGCTCAAG
CCGGCCGACC CTGAGGAGGA CGTGCGCACC TCCGCCACCG CCTGA
|
|---|
| Protein sequence | MNEVGSTVED GAEASVAVEA ADGVEIAGHE PTEITYDEQR YDSRPRALRR PRPQARLRGT
DAPPRPAAGE GPADGSNPEY VRWLLVQSML QDAQKISRQF SGQASMWQNP YAKPDPRRAV
DTAAVWFTAY PISLVTRPGR SFLGSLGDPE LWEAFQRIGI DAVHTGPVKS AGGLDGWRQT
PSVDGHFDRI STEIDPMFGT EGEFRHLCEV AAEHDGSVID DIVPGHTGKG ADFRLAEMAF
QDYPGIYHMV EIPPECWNLL PDVPPGHDAA NLDAAAEAAL SEHGYIIGQL QRVIFYAPGI
KETNWSATRE VVGVDGVTRR WVYLHYFKQG QPSVNWLDPS FAGMKLVIGD ALHSLGDLGT
SALRLDANGF LGVEKSVEGP AWSEGHPLSE AANHLIAGMV RKVGGFTFQE LNLTIEDIRD
TSEVGADLSY DFITRPGCQH AVATGDTEFL RLCLREALSL GVDPASLVHA LQNHDELTYE
LVHWATRHAE DEYDYHGARI TGGALAERIR ADLVEKLTGE NGPYNLVFTT NGIACTSASV
IAASRGHRDL AELTGEDVEQ IKRAHLLMAM FNAWQPGVFA MSGWDLLGML PLPVESVKPL
LSSGDTRWIE RAAHDLMGVA PEATVSASGV PVGRSLYGTI PEQLADEGSF ANRLSEVLTV
RRDHKIATAR QIDIPPVAHP SMLVMVHALD PADHDGREVL QVTVLNFGAE TIEGSVRSEH
FTPRVPVRDM TSGAEIGWVD DLKSFGVWLA PYAGLSLLLK PADPEEDVRT SATA
|
|---|
| |