Gene Krad_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3593 
Symbol 
ID5334211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3343178 
End bp3343975 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content75% 
IMG OID 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_001363320 
Protein GI152967536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.244317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.215314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCCG CGCGACTCAG CCTGAACCAG ATCACCGTGA ACACCCTCGG CCTGCCCGAG 
GCGCTGGACG CCTGCGTGCG CCACGACGTC GGGGCGATCG CCCTGTGGCG GGACAAGATC
GCCGCGGTCG GCCTCGACCG GGCCGTGGAG CTCGTCGCCG CCTCCGGCGT CCGCGTCAGC
TCCGTCTGCC GCGGCGGGAT GTTCACCACC GGCGACCCTG CCGACGTCCT CGCCGACAAC
CGCCGCGCCG TCGACGAGGC CGCCGCCCTG GGGGCCGACG CCCTGGTGCT GGTGTGCGGG
CCGCTGACCG ACCACGACCT CGCCGGGGCC CGGGCGCGGG TCCGCGACGG CATCGCCGCC
CTGCTGCCGC ACGCCTTGGC CGCCGGGGTG CCCCTGGCGA TCGAGCCCCT GCACCCGATG
ATGATCACCG AGCGCTCGGT CGTCGTCTCG CTGCGCCAGG CCCTCGACCT CTGCGACGAC
CTCGGCGAGG GGGTGGGGGT GGTCGTCGAC GCGTACCACG TGTGGTGGGA CCCCGACCTC
GACGCCCAGC TCGCCCGGGC GCGCGGACGG GTCCGCGGCT ACCACGTCTC GGACTGGCTG
CCGCGCACCT CCGACCTCCT GCTGGACCGC GGGATGGTGG GCGAGGGGGT CATCGACCTG
CCCCGGTTGT CCGCGGCGGT GGCCGCGACC GGCTACGACG GGCCCGTGGA GGTGGAGGTC
CTGTCCTCGC GCTGGTGGGC CGAGGACCCC GACGAGGTCG TCCGCACCGC GCGGAAGCGG
TTCGAGGAGT TCGTCTGA
 
Protein sequence
MDPARLSLNQ ITVNTLGLPE ALDACVRHDV GAIALWRDKI AAVGLDRAVE LVAASGVRVS 
SVCRGGMFTT GDPADVLADN RRAVDEAAAL GADALVLVCG PLTDHDLAGA RARVRDGIAA
LLPHALAAGV PLAIEPLHPM MITERSVVVS LRQALDLCDD LGEGVGVVVD AYHVWWDPDL
DAQLARARGR VRGYHVSDWL PRTSDLLLDR GMVGEGVIDL PRLSAAVAAT GYDGPVEVEV
LSSRWWAEDP DEVVRTARKR FEEFV