| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3528 |
|---|
| Symbol | |
|---|
| ID | 5336761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3420928 |
|---|
| End bp | 3423945 |
|---|
| Gene Length | 3018 bp |
|---|
| Protein Length | 1005 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_001363255 |
|---|
| Protein GI | 152967471 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.105108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTCCG GGGTCGCGGT GCGGGTGCTC GGCGCCCTCG AGGTCGGTTC ATCCACGCAG
GCGTCCGTGC TGCCGCCCAC GCTGCGCACC GTGCTGGCCG CGCTCGTGGT CGACGCCGGG
CACGTCGTGC CCGCCTCCGT GCTCGCCGAG CGGGTCTGGG ACGAGGCGGG GATCCGGCCG
GCCACCTCCA CGCTGCACAG CTCCGTGTCC CGGCTGCGCC GGCTGCTCGA ACCCGGCGCC
GGCCCCTGGC AGGTGCTGGT CACCCGCGCC CCCGGCTACC GGCTCGCCCT GGCGCCGGAG
GCCCTGGACG CCGCCCGCTT CGAGCAGCTG CTGCGCCGCG CGCTGGCCGC CGCGGACACC
GACCCGGGCG GGGCGCGCGC CGACGTCGCC GACGCGCTGG CGCTGTGGCG CGGCCCGGCC
TACGCCGACG TCGAGGCCGG CTTCGCCCGC CAGGAGGCCC GTCGCCTGGA GAACCTCCGG
CTGGAGGGCC TGGAGCTGGC CGCCCGCCTG GACCTCGTGC TCGGCCGGCA CCGGGAGGTC
GTCCCCGACC TCGAGGAGCT GGTGCTGGCC CACCCGCTGC GCGAGGAGCT GCGCGCCGCG
CTCGTGCTCG CGCTCTACCG GTGCGGGCGC CAGGCCGACG CCTTGCAGGC CTTCGAGGAC
GGCCGGCGGC TGCTCGCCGA CGAGCTGGGC ATCGACCCCG GCCCGCAGCT GCGCCGGCTG
CACGAGGCGG TGCTGCGCCA GGACCCCGCG CTGGAGGCCC CCGTCGTCCC GGCGGCCGAC
CCCCCGTCCC CGCCGTCGTC GCCGTCGTCC CCGGGGGCCG GGGACGACGG CGACGTCCCG
GCCCGCACCC CGGTGCGCAC CTCCACGAGC GCGCTGCCGC TAGCCACCAC CGAGCTGCTC
GGGCGCGCGG AGGACCTGCA GCGGCTGCTG GAGCTGCTGG AGCAGGCGCG GCTGGTGACG
CTCACCGGCA CCGGGGGCGT GGGCAAGACC CGGCTGGCCG CCGCGGCCGC CGAAGCCGCC
GCCGAGCGCT TCGAGGGCGG CACCGTCCTG GTGCCGCTGG CTACCCTCGA CGACGCCCGG
GCCGTGCTGC CCGCCGTCGT GCGGGCGCTG GGGCTGCCCG ACGAGGCGGG GGCGGGCGCG
CTCGACGCCG TCGCCGCCCA CGTCGCGGAC TCGCGGACCC TGCTGGTGCT GGACAACCTC
GAGCACCTGC TGGACGCCGC CGCGGACGTC GCGGCCCTGG TGCGCCGCTG CCCGCGGCTG
GTCGTCCTGG TCACCTCCCG CGCCCCGCTG CGCGTCAGCG GGGAGGTCGA GCACCGGGTC
GAGCCGCTCG GCCTGCCCGC CACCGGCGAG GACGTCCTGG GCTCCCCGGC CGTGCAGCTG
TTCGCCGAGC GGGCGCGGGC CGTCGCGCCC GGCTTCGCCG TCAGCGCGCG CAACGCCGCG
GTCGTCGCCG ACATCTGCCG CGCCCTCGGC GGGATCCCGC TGGCCCTGGA GCTGGCGGCC
CCCCGCATCC GCGTCCTGGA CCCCGCCGAG CTGCTCCGCC GCCTCGACCA CGCCCTGACC
TCCGGGCCGC GCGACCTGCC CGCCCGCCAG CGCACCATGC GCGCCACCCT GGACTGGAGC
TACGGGCTGC TCGACGCCCC CACCCGGCGG CTGTACCGCC GGCTGTCCGT CTTCACCGGG
GGCTGGACCC TGCCGGTGCT GGAGGACGTC GAGGGCCCCG GCGTGCTGGA GCAGCTCGAG
GCGCTGGTGG AGATGTCGCT GGTCACGGTG ACCTTCTCCC GGGGCCGGCC GCGCTACGCG
ATGCTCGTGC CCACGCAGCA GCACGCCCGT CGCCTGCTCG AGGAGGACGA GCTCGCGGAG
GTCTCCCGCG CGCACGCCGA GGCCCACCTG CGGCTGGCCG AGCGGGCCGC CCCGCACTAC
CGCGGCGAGG GGCAGGTCGA GTGGCTGGAG CGCGTCGAGC TGGAGCACGC CAACCTGCTC
GCGGCCTTCG AGTGGGCGAT GGGCGCCGGG GAGCACGCCA CCGCCGCCCG CCTGACCTGG
GCGACCTGGT TGTTCTGGTG GTTGCGCGGG CACGTGCTCG TCGGCCGCCG CTGCGCGCGC
GCCGCCGTGG ACGCCACCGC CGACAGCCCG CTGGAGGGCC CCGCCGCGCT GGTCCCGGTG
CGGGCGCGGA TCGCGCTGGC CGCGATGGCC TTCGCCCAGG GCGACTTCGC CGCGGCCGAC
GAGGGGTGGG CCCGGGCCTG CGCCGACGCC GAGCGCGCCG TCGGCGTCGA CCCCGTCGAG
CGCGACGAGG CGCGGGCGAA CTGCACCGCC GGGGCGGGCA TCTGCGCCCA GGTGACCGGG
GACCTCGCGG CCGCCGCCGA CGCCCACCGG CGGGCGATCG CGCTGGCCCG GACCCTGCCC
GAGGACACCT ACGGGCCGTG GATCGTGCGG CTGAACCTGG TGTGGCTGGG CACGGTGCAC
TGGCGCGCCG GGGAGGCCGG CCCGGCCCGT CGCCAGGCCG AGGAGGGGCT GGCGCTGGCC
CGCCGCGACG GCGACCGGCT GGCCACCTTC CTCGCCCTCT ACAACCTCGC GCAGGCCGAG
GCCGCCCCCG CCCCCGCCCG GGCGCTGCGC CACCTGCAGG AGGGCATCGA GCTGTCCGAG
CAGATGGGCG ACCTGGCCAA CCTGGCCTAC TTCCTGGAGG CGCTGGTGGT GCTGCGCGCC
GCCGGCGGGC GGGCGGGCGA CGACGGGGAC CACGGGGACC ACGGGAACGA GGCGGACGAC
GCGGCGGCGC TGGTGCGCCT GCTGGGGGCG GCGAGCGCGG CGCGCGAGAC CGTCGGCTTC
GAGGTCCACA ACTACTACCT CCGCGACAGC GTGGGCCGCG CCGAGGCCGA GGCCCGCCTG
CGCGCGCAGC TGGGGGAGCA GCGCTACGCG CGGGAGCTGG CCGCCGGGCG GCGGGCGCCG
GTGGCCGAGT CCGTGCGCAC CGCCGTCCGC GTGCGGCCGG TCACGGTTCC CCCGACCGCG
CCCAGTCCCG CCAGCTGA
|
|---|
| Protein sequence | MRSGVAVRVL GALEVGSSTQ ASVLPPTLRT VLAALVVDAG HVVPASVLAE RVWDEAGIRP
ATSTLHSSVS RLRRLLEPGA GPWQVLVTRA PGYRLALAPE ALDAARFEQL LRRALAAADT
DPGGARADVA DALALWRGPA YADVEAGFAR QEARRLENLR LEGLELAARL DLVLGRHREV
VPDLEELVLA HPLREELRAA LVLALYRCGR QADALQAFED GRRLLADELG IDPGPQLRRL
HEAVLRQDPA LEAPVVPAAD PPSPPSSPSS PGAGDDGDVP ARTPVRTSTS ALPLATTELL
GRAEDLQRLL ELLEQARLVT LTGTGGVGKT RLAAAAAEAA AERFEGGTVL VPLATLDDAR
AVLPAVVRAL GLPDEAGAGA LDAVAAHVAD SRTLLVLDNL EHLLDAAADV AALVRRCPRL
VVLVTSRAPL RVSGEVEHRV EPLGLPATGE DVLGSPAVQL FAERARAVAP GFAVSARNAA
VVADICRALG GIPLALELAA PRIRVLDPAE LLRRLDHALT SGPRDLPARQ RTMRATLDWS
YGLLDAPTRR LYRRLSVFTG GWTLPVLEDV EGPGVLEQLE ALVEMSLVTV TFSRGRPRYA
MLVPTQQHAR RLLEEDELAE VSRAHAEAHL RLAERAAPHY RGEGQVEWLE RVELEHANLL
AAFEWAMGAG EHATAARLTW ATWLFWWLRG HVLVGRRCAR AAVDATADSP LEGPAALVPV
RARIALAAMA FAQGDFAAAD EGWARACADA ERAVGVDPVE RDEARANCTA GAGICAQVTG
DLAAAADAHR RAIALARTLP EDTYGPWIVR LNLVWLGTVH WRAGEAGPAR RQAEEGLALA
RRDGDRLATF LALYNLAQAE AAPAPARALR HLQEGIELSE QMGDLANLAY FLEALVVLRA
AGGRAGDDGD HGDHGNEADD AAALVRLLGA ASAARETVGF EVHNYYLRDS VGRAEAEARL
RAQLGEQRYA RELAAGRRAP VAESVRTAVR VRPVTVPPTA PSPAS
|
|---|
| |