Gene Krad_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3445 
Symbol 
ID5335275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3523278 
End bp3524093 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content75% 
IMG OID 
ProductShikimate dehydrogenase substrate binding domain protein 
Protein accessionYP_001363172 
Protein GI152967388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.226729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCCA AGGACACCCA GCTGTGCATC TCCCTCTCCG GCCGCCCCAG CAACCTCGGG 
ACCCGCTTCC ACAACTTCCT CTACGCCGAG CTCGGCCTCG ACTTCGTCTA CAAGGCGTTC
ACCACCACCG ACCTCGCCGC CGCCGTCGGC GGCATCCGCG CCCTCGGCAT CCGCGGGGCC
GGGATCTCCA TGCCCTTCAA GGAAGCCGTC ATCCCCCTCG TCGACGCGCT CGAGCCCTCC
GCCGCGGCCA TCGACTCCGT CAACACGATC GTCAACACCG ACGACCACCT CGTCGCGCAC
AACACCGACT ACCTCGCCGT CGCCGGGCTG CTCGCCTCCC ACGGGATCCG CCCCGCCGGG
ACCGCCGCCG TCCTCGGCAG CGGCGGGATG GCCAAGGCGG CGCTCGCGGC CCTGCGCGAC
GCGGGTTTCG GAGACCTGCT CGTCGTCGCC CGCAACGACC AGGCCGGCCC GGCGCTGGCG
CGGGCCTACG GCGCGCGCTG GCTGCCCGAG CTGGGGACCC AGCGCCCCGC CCTGCTGCTC
AACGCCACCC CCGTCGGGAT GGCCGGCGGT CCCGCGGCGG GCGACCTGCC CGCCCCGCGC
GAGGCCGTCG AGGCCGCCGA GGCGGTCTTC GAGGTCGTCG CCGTCCCCGA GGAGACCCCG
CTGGTCCGCC TCGGGCGGGA GCTGGGCAAG CGGGTCGTCA CCGGCACCGA GGTCGCCGCC
CTGCAGGCCG CGGAGCAGTT CGTCCTCTAC ACCGGGGTGC GTCCCGGCCC CGACCAGGTG
AGCCGGGCGG GTGAGTTCTC GCGCGCCGCG GGCTGA
 
Protein sequence
MISKDTQLCI SLSGRPSNLG TRFHNFLYAE LGLDFVYKAF TTTDLAAAVG GIRALGIRGA 
GISMPFKEAV IPLVDALEPS AAAIDSVNTI VNTDDHLVAH NTDYLAVAGL LASHGIRPAG
TAAVLGSGGM AKAALAALRD AGFGDLLVVA RNDQAGPALA RAYGARWLPE LGTQRPALLL
NATPVGMAGG PAAGDLPAPR EAVEAAEAVF EVVAVPEETP LVRLGRELGK RVVTGTEVAA
LQAAEQFVLY TGVRPGPDQV SRAGEFSRAA G