Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3429 |
Symbol | |
ID | 5335643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3545543 |
End bp | 3546478 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_001363156 |
Protein GI | 152967372 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.024687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00959363 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCGGTC CCGACGACTC CCACGCCCTG CGCGGGGTCC GCGCCGGGGA ACTCGCCCCG CTGCCCACCC GGGCCCACCG CACGCACCGG GCGTACTCCT GCACGAACTG CGGGCACTGG CAGCGGTGGT TCGCCACCAC CCCGCCGCCC TCGTGCCCGG TGTGCTCCGA CGTGCGCAAC GAACTGCCCG TCGAGGGGTT CGCGTTCCTG CGCGAGACGG AGGTCGACGC CCTCGTCACG ACCTCGTGGC GCGAGGCGGT CCCGGGGGTG ACGGAGTTCT GGTGCGACCC CGTCGTGGGC CTGGGCTCCC ACGGCTGGGT GCTGGAGACC GCCGACGGGC TGCTCGGCTT CGAGGCCGCC CCGTGGTACT CCGCCGACGC GCTGGCCGAG CTGCGCCGGC GCGGCGGGTT GCGCGTGCTC GCCTCCAGCC ACGTCCACGG CTTCGGCGGC CTGTGGCAGT TGCAGGACGA GCTCGACCCG CCCGTCGTGT CGGTCGGCGT CCACGACCTC ACCTGGACCA AGGCGTTCCG CGTCACCTGG CCCGCCGACG ACGAGACCGA GCTCGCCCCG GGCATCACCC TGCACCGCAC CGGGGGCCAC TTCCCCGGGC ACAGCGTCCT GCACGACGCC GGCCGCGGCC TGCTCTTCTG CGGGGACTCC CTCAAGATCG ACCTCGACGA GCACGGGAAC CCCGCCGCGC TCAGCGCCCA CAAGGCGTTC CACGCCCAGA TCCCGCTCTC GCGCGCGGAA CTGCGCAGCG TGCGCGAGAT CCTCGGCGCG CTGGGGTTCG ACACCGTCTT CAGCCCGTTC GAGTTCGCCC GCGGCGTCAC CACCCGCCAC GTCGTCGCCC TGGTCGACCA CATGCTCACC CACCCCCCGT CGGCGGCCCC GGTGCCCTTC GACCTCCTCG ACGAGAACGT GAGGGTCTTC GCGTGA
|
Protein sequence | MTGPDDSHAL RGVRAGELAP LPTRAHRTHR AYSCTNCGHW QRWFATTPPP SCPVCSDVRN ELPVEGFAFL RETEVDALVT TSWREAVPGV TEFWCDPVVG LGSHGWVLET ADGLLGFEAA PWYSADALAE LRRRGGLRVL ASSHVHGFGG LWQLQDELDP PVVSVGVHDL TWTKAFRVTW PADDETELAP GITLHRTGGH FPGHSVLHDA GRGLLFCGDS LKIDLDEHGN PAALSAHKAF HAQIPLSRAE LRSVREILGA LGFDTVFSPF EFARGVTTRH VVALVDHMLT HPPSAAPVPF DLLDENVRVF A
|
| |