| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3361 |
|---|
| Symbol | |
|---|
| ID | 5335900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3620281 |
|---|
| End bp | 3622170 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_001363089 |
|---|
| Protein GI | 152967305 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0761003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0199865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGGGC GCATCCATCC AGACGATCTG CAGGCGGTCA AGGAGCGGGT CCGGCTCGAC
GAGGTGGTGG GGGAGCAGGT CGCCCTGCGC TCCGGCGGGG TCGGTTCCTT CAAGGGGCTC
TGCCCCTTCC ACGACGAGCG CACCCCCAGC TTCACCGTCC GTCCCGTCAC CGGGCGCTGG
CGCTGCTTCG GCTGCGGGGA GTCCGGGGAC GCCATCGAGT TCGTCATGCG CATCGACGGC
CTCGGCTTCG CCGACGCCGT GGAGCGCCTG GCCCAGCGGG CCGGGGTGCA GCTGCGCTAC
GTCGACGACG GCGGCCGCAG CACCCAGCGC CCGGCCAGCG ACGCCGGGCA GCGGCAGCGG
CTGCTGGAGA TGCACCGGGT CGCGGAGGAG TTCTACGGGC AGCAGCTGGC CGCGCCCGGC
CCGGCCGAGA CCGCCCGGGG GTTCCTCGCC GAGCGGGGGT TCAGCCGCGA GGACGCCGCG
CGCTTCGGGG TGGGGTTCGC CCCCAACACC GGCGACGCGC TGCTGCGGCA GCTGCGCGCC
AAGGGTTTCG GCGAGGAGGA GCTGGTCACC TCCGGGCTGG CCGGGCAGGG TCAGCGCGGT
CTCTACGACC GGTTCCGCGG GCGCCTGGTG TGGCCGATCC GCGACGTCGG CGGGCACACC
GTGGCCTTCG GGGCGCGCCG GCTGTTCGAC GACGACCGCA TCGAGGCGAA GTACCTGAAC
TCCCCCGAGA CCCCCGTCTA CAAGAAGTCC CAGGCGCTGT ACGGGCTGGA CCTGGCCAAG
CGCGAGATCT CGCGCACCAA GCGGGTCGTC GTCGTCGAGG GCTACACCGA CGTCATGGCC
TGCCACCTCT CCGGGGTGGG GACGGCCGTC GCGACCTGCG GGACGGCGTT CGGGGAGGAC
CACGCCCGGA TCGTGCAGCG GATGCTGGGG GAGGCCGACG GGTCCGCGGA GGTCGTGTTC
ACCTTCGACG GCGACGCCGC GGGGCAGAAG GCCGCCCTGA AGGCCTACGA GCTCGACCAG
CGGTTCAGCG CCCAGACCTA CGTCGCGGTC GCCCCCGCCG GGCAGGACCC CTGCGAACTG
CGGCTGTCGG CCGGGGAGGC GGCGGTGGCG CAGCTGGTCG AGGGCCGGGT GCCGCTGTTC
GAGTTCGCCA TCCGCTCCAC CATCGAGCGG TTCGACCTGA ACTCCGACGC GGGCCGGCTC
GCCGCGCTCG ACGCGGCCGC CCCCATCGTC GGGGCCATCC GCGACCGCGG TCTACAGCAG
CGCTACGCCA TCAACCTCGA CCGCTGGACG GGGTTCCTCG ACGAGCGGTT CGTCCTGGAC
CGGGTGCGGG CGCACTCCGG CGCCCGGCCC GCGCAGCAGC CCGGCCGCCC CGCCGCGGCC
GTGGCGCCGG CCCCGCCCCG GCTGCCCGCC GCCGATCCGC GCGACCCCGT CGCCCAGCTG
GAGCGGCAGG TCCTGTCCTG CGTCCTGCAG GCCCCCTGGG CCGTGGCCGA CGTCTTCGAC
TCCCTGGAGG CCGACGCGTT CGGCGCCCCC GGGCACCGGG CCGTGCACGA CGCCGTCACC
GCCGCCGGCG GCCCGGGGGA GGCGCCGCAG GGCCCGGCGT GGCTGGCGCG CGTCCTCGAC
TACGCCGACG GCCCCGTCGC GGGGCTCGTC GACGAGCTGG CGGCCAGCGA CCTGCCGGTG
TCCAACGAGG AGGAGCTCGA GCGCTGGGGG CGCCAGCTCG TCGCCGCCCT CGTCGGGCAG
TCGGCGACCC GCGCGGTCGC CGACGCCCGC CGCACCCTGC AGCGGCTGGA CCCCACCAGC
CAGGCCGAGG AGTACGCAGC CGTCTCGGCG GAGCTGTTCC GGCTGGAGGC CGCCCGGCGG
ACCTGGCAGG AGCGGGCCCA GGGCGCCTGA
|
|---|
| Protein sequence | MAGRIHPDDL QAVKERVRLD EVVGEQVALR SGGVGSFKGL CPFHDERTPS FTVRPVTGRW
RCFGCGESGD AIEFVMRIDG LGFADAVERL AQRAGVQLRY VDDGGRSTQR PASDAGQRQR
LLEMHRVAEE FYGQQLAAPG PAETARGFLA ERGFSREDAA RFGVGFAPNT GDALLRQLRA
KGFGEEELVT SGLAGQGQRG LYDRFRGRLV WPIRDVGGHT VAFGARRLFD DDRIEAKYLN
SPETPVYKKS QALYGLDLAK REISRTKRVV VVEGYTDVMA CHLSGVGTAV ATCGTAFGED
HARIVQRMLG EADGSAEVVF TFDGDAAGQK AALKAYELDQ RFSAQTYVAV APAGQDPCEL
RLSAGEAAVA QLVEGRVPLF EFAIRSTIER FDLNSDAGRL AALDAAAPIV GAIRDRGLQQ
RYAINLDRWT GFLDERFVLD RVRAHSGARP AQQPGRPAAA VAPAPPRLPA ADPRDPVAQL
ERQVLSCVLQ APWAVADVFD SLEADAFGAP GHRAVHDAVT AAGGPGEAPQ GPAWLARVLD
YADGPVAGLV DELAASDLPV SNEEELERWG RQLVAALVGQ SATRAVADAR RTLQRLDPTS
QAEEYAAVSA ELFRLEAARR TWQERAQGA
|
|---|
| |