| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_2783 |
|---|
| Symbol | |
|---|
| ID | 5333730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 4215412 |
|---|
| End bp | 4217082 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001362517 |
|---|
| Protein GI | 152966733 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.24952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG CGGCGGGGCC GGCCGAGCCG CGGTTGCGCC GCTCGCGGGC CCGGTGGGCC
TGGGCCGTCG GCGTCCTCCT CGTCGTGGGG TGGTCCCTGG CCGGGGCGGG GGCGTTCTCC
GGGGAGGTGC TGAACCCGGC CGGGGTGCGG CAGTTCACCC GCTTCGCCGT CGGCGCGCTG
CACCCGGACC TGTCCGCGGA CTTCCGCGGT GTGCTGGTGA CGAGCACGCT GGTCACCGTC
GCCTACGCCG CGCTGGGGGC GGCGCTGGCG GTGCTGGCCG GGGCGCTCGG CGCGCTCGCC
CTGACCCGCA CGACGTGGGG GCGCCGGCGG GCGGGCTGGG TGCTGGCCCG CGCGGTCGTC
GCCGTCCCCC GCGGTCTGCA CGAGGCGGTG TGGGGTCTGT TGCTGGTCAA CGTCCTCGGC
CTGAACCCCT GGGTGGGGGT CCTGGCCATC GCCGTCCCCT ACGGCGCGGT CAGCGCGAAG
GTGTTCGCCG ACCTGCTCGA CGAGGTGCCC CGCGGTGGGT ACGAGGCGCT GCTGGCCGCC
GGCGCCGGCC GCGGGGTCGC GGCGCTCTAC GGGCTCCTGC CCCCGGCCGC CGGGGGACTG
CTGGCGTACG CGTTCTACCG GCTGGAGTGC GCCGTGCGCT CGGCGGTGGT GCTGGGGCTC
ATCGGCGCCG GCGGGCTGGG GTACCAGCTC TCGCTGTCGT TCAGCTCGCT GCGCTGGGAG
CAGGTCTGGA GCTGCGTCTA CGCCCTGACC GCGCTCTGCG TCGCCGCCGT CGTCGCCGGT
CGTGCGGTGC GCCGCCGCCT GAGCGACCCG CCGCCCGTGC GGGGGGACCG GCTGCGGCGC
GACGCCGCGC TGACGTGGGC GGGGCTGGCC GCCCTCGCCC TCACCGCGTG GTCGTGGTGG
TACCTGGCGG TCGACCCGGC CACCCTGGTC GACGTCCGGG CGCGGGAGCA GGTGTCCTAC
CTGGCCGGGC TGGCGTGGCC GGTCAGCACC TCCGGTCCGC TGCTGCACGC GCTGGGCCGC
GCCGCGGTCG ACACGGTGCA GATGTCGGTC ATCGCCATCG CCCTGGCCAC CGCCGGTGCG
GTGCTGCTGT CCGGGCTCGC CGTCCGCCCG GCCCACCGGC GCCACTCCAC CCACCCGGGT
CGCGCCCCGC GACGCCCCGG GGTGCGGCGG GCCGCCGTCG TCCTCGCCGG TGCGGTCGTG
CGGGGTCTCG TGCGGGGCGC GCTGCTGCTC CTGCGCGCCG TGCCCCCGCC GGTGTGGGCC
CTGGTCCTGC TGTTCGTGCT GCGCCCGGGG ATCCTCCCGG GTGCTCTCGC CCTGGGGGTC
TACACCCTCG GCGTCCTCGG CCGGCTGACC GCCGAGGCGC TGGAGGAACT CGACCCGCGA
CCGGCGCGGG CGCTGACGGT GCTCGGGGCG AGCGCGAGCG GGGTGTGGCT GTACGGGGTG
GCGCCGCGCG CGGTGGGCCC CGTGTTCGCC TACGCGCTGT ACCGGTGGGA GGTCGCGATC
CGCGACACGG TGCTCGTCGG GTTGCTGGGC GCGGGCGGCC TCGGTGCGCT GCTCGCCACG
TCGCTGCAGA CGTTCGACTG GCCCGCCGTG GCCACGACCC TCGGGGTGCT GGTGCTGCTG
ACCCTCGCCG TCGACCTCGT CAGCGACCGG GCGCGGGAGG TGGTGCGCTG A
|
|---|
| Protein sequence | MSAAAGPAEP RLRRSRARWA WAVGVLLVVG WSLAGAGAFS GEVLNPAGVR QFTRFAVGAL
HPDLSADFRG VLVTSTLVTV AYAALGAALA VLAGALGALA LTRTTWGRRR AGWVLARAVV
AVPRGLHEAV WGLLLVNVLG LNPWVGVLAI AVPYGAVSAK VFADLLDEVP RGGYEALLAA
GAGRGVAALY GLLPPAAGGL LAYAFYRLEC AVRSAVVLGL IGAGGLGYQL SLSFSSLRWE
QVWSCVYALT ALCVAAVVAG RAVRRRLSDP PPVRGDRLRR DAALTWAGLA ALALTAWSWW
YLAVDPATLV DVRAREQVSY LAGLAWPVST SGPLLHALGR AAVDTVQMSV IAIALATAGA
VLLSGLAVRP AHRRHSTHPG RAPRRPGVRR AAVVLAGAVV RGLVRGALLL LRAVPPPVWA
LVLLFVLRPG ILPGALALGV YTLGVLGRLT AEALEELDPR PARALTVLGA SASGVWLYGV
APRAVGPVFA YALYRWEVAI RDTVLVGLLG AGGLGALLAT SLQTFDWPAV ATTLGVLVLL
TLAVDLVSDR AREVVR
|
|---|
| |