| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_2533 |
|---|
| Symbol | |
|---|
| ID | 5334045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 4469519 |
|---|
| End bp | 4472074 |
|---|
| Gene Length | 2556 bp |
|---|
| Protein Length | 851 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | alpha-L-rhamnosidase |
|---|
| Protein accession | YP_001362272 |
|---|
| Protein GI | 152966488 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGG CGGAGGGGGC GCCGCCCCCC GCAGAACCCG ACCAAGACCG AGACCAGGAC
CAGGAAGGAC CGCACCCCGT GCCCACGCCG TGGACCGCCC ACTTCATCAG CACCGCCACT
CCCGCCGCGG CCGAAGACCC CGCGCTGTAC TTCCGGCGGG ACTTCACCGT CGCACCGGGA
CTGCGTCGCG CCGTGCTCCA CGTCAGTGCC CTCGGCGTCA TCGAGCCGTA CCTGAACGGG
CGTCGGGTCG GGGACGACGT CCTGGCCCCC GGCTGGACCT CCTACCGGCA CCGTCTGAAC
GTCAGCCGTC ACGACGTGAC CGCGGAGGTG AGAGAGGGAC CCAACACCGT GGGCGCCGTC
GTGGGACAGG GGTGGGCGGT CGGGCGCCTG GGTTTCGAGC ACCAGTGCCA CCACTACAGC
GACCGGCCCG CGCTCTTCGC GCAGCTGGAG CTGGAGTACG CCACGCACAG CGAGGTCATC
GGCAGTGACG CCACCTTCCG GGTCGGCACC GGGGGAGTGC GCGCCAACAG CATCTACGAC
GGCGAAACCT ACGACGCGGG CCTGGAGCCC GAGGGGTGGT GCGCTCCCGG CTTCGACGAC
TCGACGTGGC AGGCACCCAC CCACCTGGAC TGGCCCTCGC ACACCCTGCA GGTGGCCATC
ACCCCACCCA TCCGACGCGT CGAGGAGCTC GCTGCGCTGA CGGTGCTGAG CACCCCGAGT
GGACGCACCG TCGTAGACTT CGGCCAGGTC TTGACCGGCT GGGTGCGCCT GCAGGTGCAG
GGAGACGCCG GGCGCACGAT CACCCTGCGC CACGCCGAGG TGCTGACCTC CCAGGGTGAG
CCGGAGTACG AGACGCTGCG CACCGCGCAG GCCACCGACC GCTTCGTCCT GCGCGGCGCT
GGCGTGGAGC ACTTCGAGCC CCGCTTCACC TTCCACGGGT TCCGCTACGT CGAGGTGGAG
GGCTGGCCCG GTGAGCTGAA CCCCGACGCG ATGCGTGCTG TCGTCGTGCA CAGCGACATG
ACCCGCACCG GCTGGTTCGA AAGCTCCCAC GCCCTGCTGA ACCGGTTGCA CGAGAACGTG
GTGTGGTCCA TGCGCGGCAA CTTCGTCGGG GTACCCACCG ACTGCCCTCA ACGCGATGAG
CGACTGGGCT GGACCGGAGA CCTCAACGCC TTCGCCCCCA CCGCTGCCTT CCTCTACGAC
GTCCGCGGCG TCCTGGGCTC CTGGCTGGCC GACCTGGCCG CGGAGCAGGC GGACAAGGGG
GTCGTGCCCT GGGTGGTCCC CGATGTCCTC AGCACCCCCT CCGCCCCCAC AGCCCTGTGG
AGCGACGTCG CCGTGAGCCT GCCGTGGACC CTGTACTGGG AACACGGCGA CCTGGAGATC
CTGCGCCGCA GCTACCTGTC CATGTCCGCC TTCGTCCACC AGGTCGAGGC GCTGCTCGAC
GAGCGGGGCC TGTGGAACAC CGGCTACCAG TTCGGTGACT GGCTGGACCC CGACGCCCCG
CCCGAGGACG CAGCCGGCGG TAAGACGGAT CGGTACCTGG TGGCCTCGGC CTACTTCTGC
CGCACCACGC AGATCATGGC CCAGACCGCG GCCCTGCTGG AGCAGACCGC GGACGCCGAG
CACTTCGCGG ATCTGGCGCG ACGCGTGCGC AGCGCCTTCC GCCACGAGTT CGTCAGCGCC
TCCGGACGCC TGGTCAGCGA ATCGGCCACC GCCTACTCCC TTGCCCTGTG TTTCGACCTG
CTCGAGGAGG ACCAGCGGCG GACCGCCGGC GACCGGCTGG CCGAGCTGGT GCGCAAGGCC
GGCTACACCG TCTCCACCGG CTTCGCCGGT ACCCCCCTGG TGGCCCACGC CCTCTCTGAG
ACCGGGCACC TGGACGCGGC CTACTTCCTA CTCACCGAGA CCGACCGGCC GTCGTTCCTC
TACCCCGTCA CGATGGGTGC TACGACGATC TGGGAGCGGT GGGATGCGGT CCTGCCCGAC
GGAACGCTCA ACTCCACTGG CATGACCTCG CTGAACCACT ACGCGCTGGG GGCGGTCGCC
AGTTGGCTGC ACCGCGTCGT CGGTGGCCTG CAAGCCGAGG AAGCTGGCTA CCGACGGATG
CGCATCGCCC CGCAGCCCGG CCCGGGGGTC ACCTCAGCCC ACGTGAGCCA CCAGACCGGG
TACGGCACCG TAGACGTCGC ATGGGTGGTG CAGGCCGGCA CGGTTTCCCT GGACGTGACC
ATCCCCGAGG GCACCAGAGC TCGCGTCGTC CTTCCCCTGC ACCCGGACCT GACCGAGACC
GAGGTGGGTG GCGGCACCCA TCACTGGTCC TACCCGGCGC CGGCGGGATG GGGCGAGCGC
ACGATGTTCA CGCTGGACAC GCCGCTGAAG ACCATCGCTG ACGACCCGCT CACCTGGAAG
GCGGTCAGCC GGGTCTTCAA GAAGCACCTG CCCTTTCCCG TCGACGGCTC GGCGCCGGAA
GCGGCAGCCA TGCCGCTGCG GACGTTGCTG GGCCTCATTC CCCACGCCTC CGCGCAGCTG
CGGGACGACC TCGAGGCGGC GTTGCAGACC GTGTGA
|
|---|
| Protein sequence | MTAAEGAPPP AEPDQDRDQD QEGPHPVPTP WTAHFISTAT PAAAEDPALY FRRDFTVAPG
LRRAVLHVSA LGVIEPYLNG RRVGDDVLAP GWTSYRHRLN VSRHDVTAEV REGPNTVGAV
VGQGWAVGRL GFEHQCHHYS DRPALFAQLE LEYATHSEVI GSDATFRVGT GGVRANSIYD
GETYDAGLEP EGWCAPGFDD STWQAPTHLD WPSHTLQVAI TPPIRRVEEL AALTVLSTPS
GRTVVDFGQV LTGWVRLQVQ GDAGRTITLR HAEVLTSQGE PEYETLRTAQ ATDRFVLRGA
GVEHFEPRFT FHGFRYVEVE GWPGELNPDA MRAVVVHSDM TRTGWFESSH ALLNRLHENV
VWSMRGNFVG VPTDCPQRDE RLGWTGDLNA FAPTAAFLYD VRGVLGSWLA DLAAEQADKG
VVPWVVPDVL STPSAPTALW SDVAVSLPWT LYWEHGDLEI LRRSYLSMSA FVHQVEALLD
ERGLWNTGYQ FGDWLDPDAP PEDAAGGKTD RYLVASAYFC RTTQIMAQTA ALLEQTADAE
HFADLARRVR SAFRHEFVSA SGRLVSESAT AYSLALCFDL LEEDQRRTAG DRLAELVRKA
GYTVSTGFAG TPLVAHALSE TGHLDAAYFL LTETDRPSFL YPVTMGATTI WERWDAVLPD
GTLNSTGMTS LNHYALGAVA SWLHRVVGGL QAEEAGYRRM RIAPQPGPGV TSAHVSHQTG
YGTVDVAWVV QAGTVSLDVT IPEGTRARVV LPLHPDLTET EVGGGTHHWS YPAPAGWGER
TMFTLDTPLK TIADDPLTWK AVSRVFKKHL PFPVDGSAPE AAAMPLRTLL GLIPHASAQL
RDDLEAALQT V
|
|---|
| |