Gene Krad_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_1868 
Symbol 
ID5337451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp359394 
End bp360818 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content79% 
IMG OID 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_001361618 
Protein GI152965834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCCG CCTCCACCAG TCCGCGCCCG TCCCGGCGTC TCCTCCGATC CCCCCTCCTC 
CGCGCCTCTT CCGCTGCGGC GGTGGGGGTC ACCGTCCTGG TGGTCGCGGC GGGGTGCGGT
TCCGACGACG AGCCGGTGAC GAGCACGGCG GCCGTGGCGC GCGGCGACGT CGCCGAGGTC
GTCGACGCCC CGGGGACGGT GCAGCCGCGG GCCTCCGCGG TCGTGAAGGC CCCCGCGGCG
GGGACGGTGG CGACGCTGCT GGTGGCCGAC GGGCAGCAGG TCGCGGCGGG CGACGTGCTC
ATGACGATCG ACTCCCCCTC GGCGGAGGCG AACCTGGAGC AGGCCGAGGC CGCCGACGCG
GAGGCGGCCT CCTCGGCCTC CTCGGGGTCC TCGGCGAGGA GCTCCTCGCA GGTGGCGGCC
CAGCAGCGGC GGGCGGCGGC GGACGCGCAG GCGCGCTTCG CCGAGGCCGA GCAGCAGGCC
CAGGCCATCG CCGACCCGGC GGCGCGCGCC GCGGCCCTGG CCGCGGTGCA GTCCTCGCGC
ACGCAGTACC AGCTGCTGTC CTCCCAGACG CAGGCGCTGG TGGACCAGGT GAACTCCGGG
CTGGGCAACC TGGACTCCGC GGTGGAGTCG CTGGGGCAGG CCCAGCGGGT GCAGACGCGG
GCCGCGGTGG CCGCGGCGCG GGCCACGGTG GACGCCCTGA CGGTGAAGGC CCCGATCTCG
GGGAAGGTGT CGCTGGCCGC CACCGGCGGG GCGGGCTCGC CCGCCCTGCC CGCGGGCGCG
GAGCAGCTGC TGGCCGGTTC CGGGGTGCAG GTCCCCCAGG GCGCGCTGGG CGGCGGGGAC
GCCGGGGCGG CGGGAGCCCC GGTGCTGGCG CAGGGGGCGG CGGTGGCCGC GGGCTCGACG
GTGCTCAGCG TGATCGACGC CTCCACGCTC AGCCTGACCG CCGACGTCGA CGAGACCGAC
GTGCTCTCGG TGCAGCCGGG GGTCGCGGCG GACGTGACGG TCGACGCGGT GGCGGGGGCG
CGCTACCGCG CCACGGTGAC CAGCGTGGAC CCCACCGCCC GGGGCGGTGG CGGGGGCGCG
GTGACGTACA CGGTGCGGCT GAGCTACGAC GGCGGGACCG GCCCGGACGG GGAGCCGGCG
GCGACCCCGC TGCCGGGGAT GTCCGCGTCG GTCTCGCTGG TGGTGCGCAG CGTCACCGAC
GTCGTGGAGG TCCCGGCGTC GGCGCTGGTG CGGGCGGGGG CGCAGAACGG CTCCCCGGAC
TCGGACACGG TGTGGGTCGT CTCCGGGGGC GAGGCCCAGC GCCGCGAGGT CGTCGTGGGC
GTGCGCGGGG ACTCCGACGT GGAGATCACC GACGGGCTCG CGGCGGGCGA GGAGATCGTC
ACCCAGGGCG CGGCCGACGT CACCCCGGGG CAGCGGATCC CGTGA
 
Protein sequence
MPAASTSPRP SRRLLRSPLL RASSAAAVGV TVLVVAAGCG SDDEPVTSTA AVARGDVAEV 
VDAPGTVQPR ASAVVKAPAA GTVATLLVAD GQQVAAGDVL MTIDSPSAEA NLEQAEAADA
EAASSASSGS SARSSSQVAA QQRRAAADAQ ARFAEAEQQA QAIADPAARA AALAAVQSSR
TQYQLLSSQT QALVDQVNSG LGNLDSAVES LGQAQRVQTR AAVAAARATV DALTVKAPIS
GKVSLAATGG AGSPALPAGA EQLLAGSGVQ VPQGALGGGD AGAAGAPVLA QGAAVAAGST
VLSVIDASTL SLTADVDETD VLSVQPGVAA DVTVDAVAGA RYRATVTSVD PTARGGGGGA
VTYTVRLSYD GGTGPDGEPA ATPLPGMSAS VSLVVRSVTD VVEVPASALV RAGAQNGSPD
SDTVWVVSGG EAQRREVVVG VRGDSDVEIT DGLAAGEEIV TQGAADVTPG QRIP