Gene Krad_1710 details

Gene Information

• Locus tag: Krad_1710
• ID: 5334057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Kineococcus radiotolerans SRS30216
• Kingdom: Bacteria
• Replicon accession: NC_009664
• Strand: +
• Start bp: 488905
• End bp: 494892
• Gene Length: 5988 bp
• Protein Length: 1995 aa
• Translation table: 11
• GC content: 71%
• Product: Transglycosylase domain protein
• Protein accession: YP_001361460
• Protein GI: 152965676

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGACCT ACGACGCAGG CCGGGTCGTC CTCACGGTCT GGCCCTCCTT TGCCGGAGTC 
CAGGAGCGCA TCGGCCGCGA GGCCGGCAAG TGGGGCCGCG ACGCCGGCCG GGCGTACCAG 
ACGGGCTTCA ACCGCGAAGT GGCCGCGGCC CCGACCGTGA ACCCCGGCCC CTCCGACGCG 
GAGGCGGCTC GGCTGGGCAA CGACGCGGGC AAGGCCTACG GCAACGGGTT CCGCAGCGGC 
GTCGGCTCCG GCGGCCCCGC GCCGGTGCCC GGCCCGTCCC CCTCGCAGTC GCGTCAGCAG 
GGGCAGCGCT CCGGTGGCGC CTACGGTGAC GCGTTCCGCG CGCAGCTGGA GCAGGCGACG 
CGGTCGCTGC CGCGCATCGA GCTGCCGATG GCCACCACCG AGGCCAAGCA GAAGATCCGC 
GACCTGCGCA CCGACCTCGA GCGCCTGTCG AACCAGCGCA TCGGCATCGA CGTCGACGCG 
GCCACCGCCG AGGCGGAGGT CGAGCGACTC CTGGGTCAGC TGCGGGCGTT GAACGCCGCG 
GCGACCGACG TGCAGGTCCG GGCCGACACC GCGGGCGCGA TCGCCAAGCT GGAGGGTCTA 
CAGGAGCAGC TGCGCAGCCT GTCCGGGGCG ACGGTGGACG TCGACCTGGA GGTGCAGGAC 
GGCTCGTTCG CGGCCCGCAT CCGCCAGGCC ATCGAGCGGG CCCAGGCGGC GCTGCCGCGC 
ATCGAGATCG ACGCGGACAG CTCCGACGCC GAGGTCGAGA TCCAGCGCAT CCGGGGGCGC 
CTCGACGCGC TCGGGAGCCG CCGCATCGGC GTCGACATCT CCGCCGCGGA CGCCGCGGCG 
CAGATCACCC GCCTGCAGGG CCGCCTGGAG CGGCTGCAGG CCAGCACCAC CGACGTGCGG 
GTCAACGCCG ACGCTGCAGC TGCCGCCGCG GCACTGGCGG CCGTGCAGGC GCAGGTGGAC 
CGCCTCAACG GCTCCAGCGC CCGCGTCGAC GTCGACTCGA CCAGCATCAA CACCTTCTCC 
GGCCGCCTGG TCCTGCTGGG CACGGCCATC GCCTCCATCG CCCCGGCGCT GCTGCCTATC 
GGCGGGATCG CCATCACCAG CCTCGGCGCC ATCGGCGCCG CGGCCACCAC GGCCATCCCC 
GCGTTGGCCA CCCTCGTCCT GGGCTTCAAG GGCGTCGGTG AGGCGCTGAA GCAGATGGGC 
AAGGTGCAGG ACGAGTCCGC CGGGCTGGCG GACAAGAACA GCGAGGCCGC GCAGCAGCAG 
GCGCAGGCCC AGGCCGCCGC AGCACGCCAG GTGGAGTCGG CCGAGGCCAG CCTGGCCAAC 
ACCCGCGCCA ACGTCGCCGA AGCGGAGCAG CGGACTGCCC AGCAGATCGC GCAGGCCCAG 
CAGGGCGTCA TCAAGGCCCG GGAGGACGCG GCGCGGTCCG CGGCGACCGC GGCCCGGCAG 
GTGCTGGACG CGCAGGCCGG CCTGGCCGAC GCCGAGGAGG CACTGGCCGA GTCGGTCGCC 
GCGGCGACCA AGCGCGTCAC GGACGCCCGC GAGGCCGCTG CCCGCTCCGC GGAGGCCGCT 
GCCCGTCGCG TCGCCGACGC GGAGCGGGAC CTGCAGGACG CCCGCCAGGC GGCCGACGAG 
GCCGCGGTGC AGGACGCCAA GCGCGTCGCT GACGCCCGGG AAGCCCTCGC GCGAGTCACC 
ACCGACGGCG CCCAGCGGGT GCAGACCGCC CTGCGCCGTC AGACGGACGC CGAACGCGAC 
TACTCCGATG CCCTCCGGAC CGAGCGGGAC CTGCAGCGTG ACCTGGCGCA GGCCCGCAAG 
GACGCGCAGG ACCAGCTGGA GGACCTGTCC TTCCGGGTGC GCCAGGGCGC GCTCGACGAG 
AAGCAGGCTG GCCTGGACCT CGCTGAGGCC CGGGCGGAGT ACGAGAAGGC GCAGACCGAC 
GGCAAGGCAA CCGATGCGTC GCGCGAGCAG GCCCGCATCC GCTTCGAGGA AGCGAAGTTG 
CAGCTGGAGC AGCTGGAGGT CAGTAACCAG CGCCTGGCTG AGCAGCAGGC CGAAGCTAAC 
GAGGAGGGCG TCGAGGGCTC TGACGCAGTC GCGTCCGCCC AGGAGCGCAT CGCCGCCGCG 
GTGCGCGCCC GGGAGGACGC CGATCGGGCC GCCCGTGAAG CGGCGGCCGG GGTCGAAGCG 
GCGCGGGTGG AGGCGGCCAA CGCGGTCGCT GACGCCGAGG AGCGTCTGGC GGAGGCGAGC 
TCGGCCCGGC TGAAGGGTCA GGAGGACGGC GAACGCCGTG TTTCCGACGC CCAGCGAGCC 
CTGGCCGATG CGCTCGGTGC GCAGACGCAG GCGCAGGTGA ACGCCGCGGA GCGCATCACC 
GAAGCCGAAG CCGCCCGCAT GGAAGCCCAG GAGGACGGCG CCGAGCGGGT CGCGGGCGCG 
CAGCAGAGGG CGGCCGACGC GGTCGCCGGC GCTGAGCGGA CGCGACTGGA GGGCTTGGAG 
CGGATCGCGC AGGCGCAGGA CACGGTCAGC CAGGCCGTGA CCGCGCAAGC GGAGCAGCAG 
CGCTCGGCCG CGTTCTCGCT GGAGCAGGCG GAGCGCTCGC TGGCCGGCGC TCGTGAGTCC 
GCGGCGACCG CTGCAGCTGG CGGCGCCGTC GCGGCGACGG CAGCGATGCG GAACCTGGAC 
ACGGCGATGG GCAAGCTGTC GCCGCTGCAG CAGGAGTTCA CCCGGTTCCT GTTCGGCCTC 
GGCCCGCAGC TGGGGGTCCT GCAGGACGCT TCAGCGGCCG GTCTGCTGCC GGGTGTGCAG 
CGCGGGATCG AGGCGCTGCT GCCGCTCATG CCGACCTTCG AGCGGCTGGC GCTGACGTTC 
GGGACGGCCC TGGGGTCGCT GTTCGAGCGG GCCGGGCAGT CGCTGGCCGG TCCGGAGTTC 
CAGCGCTTCT ACGTCTTCCT GGAGACGCAG GGGCCGGGGA TCCTGTCCTC GCTTGGCACC 
CTCGTGGGGT CGGTGTTCTC GGTCTTCAAC GGACTCGCGG AGGCCTTCGG GCCGATCGCG 
GCGCAGACCA TCACCTCGCT GGCCGGGCTG ACGCAGCGGT TCGCTGACTT CCTGCACACC 
GCTGGCGACA ACGAGTCCTT CCAGGACTTC CTGCGCTACG TGCAGGAGAA CACCCCCGCG 
GTCATGGAGT TCCTGGGCTC CCTCACGGAC GCCTTCGTCA ACATCATCCG GTCCATGGCG 
CCGTTCGGAC CGGTCGTGCT GGGCGTCATC GGCTTCCTGG CCGACATGAT CGCCGCCGTG 
CCCCCCGGGG TGCTCGCGGC CATCGCCCTG GCCGTGACGG GCATCGTGAC GGCCTTCACC 
ATCCTCGGCC CGGTCATCGC CTTCGTGTCA ACGATCATCG CTGGCATCAG CGCCGGCCTG 
CCCGTCCTGG CCGTCATCAT CGCGGCGTTC GGGGGGCCGG TGACGCTGAT CGTCGCCGGG 
GTCGTCGCCC TGGGCGCGGC CTTCCTCGCG GCCTGGCACC ACTCGGAGAC CTTCCGCAAC 
GCGATCTACG GGATCGGCGA CGTCTTCGTC TGGCTGTGGG AGAAAGCGTC CTGGCTCGGA 
AACATGCTCT TTGATGGCAT CCTGTGGCCC TTCCGGAACC CGGGCGTCAT CTGGGACGGC 
ATCAAGTCGG GCTTCTTCTT CTTGCTCGAA GCGATCAAGG AGTTCTTCGG GATCCACTCC 
CCCTCCACGG TCTTCGCGGA GATCGGCGAG TTCCTGATCC TGGGTCTGCT GTCCGCCTTC 
GAGGGGCTGC AGAAGCGGGT CCACGCCGCC TTCATCGTCG TCAAGCAGGC CCTCCTCGAC 
GTCTGGGGCA TCGTCGTCGA CAAGGTCTGG AACCCCATCC AGACGTTCCT GACGGTCACG 
CTGCCCGGCT ACTACACCAC CGCCGTCAGC GGGATCGCCA GAGCGTGGGA GTGGGTCAAG 
GACACCGTCC GCAAGCCGCT GGACTGGCTT CGCGACAACG TCTTCGCGCC CTACTTCACC 
TTCTACACCG TCACGCTGCC CGGCTGGTTC ACCACAGCAG TCGGCTTCAT CGGCACCGAG 
TGGGGCAAGT ACGCCAAGAA GATCACGGAC CCCATCGACT GGTTGCGCGA CAACGTCTGG 
AACGTCTTCG CCAACTTCCT GACGGTGAAG GTCCCAGGCT TCGTCGCCTC GGGCGTCAAC 
CTCATCGGCA CCGAGTGGGC GAAGTACGCC AAGAAGATCA CAGACCCGAT CGACTGGTTG 
CGCGACAACG TCTGGAACGT CTTCGCGAAC TTCGTGACGG TGACCCTGCC GGGCTACTTC 
ACCACCGCGA CCGACCGCAT CGGCGCCGCC TGGGACATGA TCAAGGAGAA GCTGAAGCAG 
CCGATCCGGT TCGTCATCGA CACCGTCATC AACCAGGGCA TCGTCGACGC CTTCAACTGG 
ATCGCCGGCA AGGTCGGCCT GCCCCAGGAC AAGCAATTGC AGCGGTTCAA GCTCCCCGAG 
GGCTTCGCCC GAGGCGGCGT CCTCGCCGGG CAGTCGTCGT GGCGTGACGG CGACGACCAG 
CTCGTCCCGA TGCGTCGCGG TGAAGGCGTC GCCGTCTCCG AGGCCATGCA GGTCCCAGAG 
GCCCGGGAGC AGCTGCTGAC CTGGAACCGC CTCGGCGTCC AGGGCGGCGC CAGCGCTGTC 
CGGCAGTACA TGCGGGGCAT GCAGGGCTAC GCCCGCGGCG GCATCGTCGA CCTCGGCCGC 
TGGTTCCAGG GCAAGGGGGC ACGCGTCGCC GAGCACCCCG CATTCGGTGG CGTCTCCAAC 
GTCCACCGAG GCCGCGGGCA CTACGAGGGC CGCGCGATCG ACGTCAACCG CAACGGCAAC 
AACGGCTCGG AGAGCGACTA CGAGAAGGAG TTCTTCGACC GCTACGCCAA CGCCCTGAAG 
GCGGCCGGGT GGACGGTGTA CTGGCGGGTG CCGGGCCACT TCAACCACCT GCACGCCGAG 
GCTCCCACCC GGAGCTTCGA GGGCGCCTTC CCCGACGGCG GCATCCTCAG CGCTATCGGT 
GACCTCGCCG CCGGCGCCTG GGACTTCCTC TCCGGGCTCA ACCCGATCGA CTACCTCAAG 
GGCAAGGTCG GGGAGCTCAT GGGCTCCGTT CCCGGGGCAG GCGCAGCCCT GGACCTGGCG 
AAGGCTGTGC CGAACAAGCT GCTCGACGTC GCTGGCAGCA GCATCATGTC GCTGCTGTCG 
TCGGTCAACC CGTTCGACGG CAGCGAGAAC GACACGCCCT CCGCGCTCGG CGGCACGGCC 
GCCCAGAACC GGGAGGTCGT GCGCCAGCGC GCGGCTCTGC GCGGGTGGGG CGACGGCCCG 
CAGTGGGCCG CGCTCGACTG GCTGGTCAAC AAGGAGTCCA GCTACCGCAA CGACGTCAAG 
AACCCCACGT CGACGGCCTA CGGCTTGTTC CAGTTCCTCA ACGGCACCTG GGACGACGTC 
GGCGGGCGGA AGACGTCCGA CCCGGGACTG CAGACCGACT ACGGGCTGCG GTACATCGCG 
CAGCGCTACA CCGACCCCAT CGGGGCGAAG CGCTTTCACC AGAAGAACGG CTGGTACTGG 
GGCGGCGGCA TCATCGGCCA GCCGGAGGCG CACAACCTGC GCCCCGGGCC CGGGAAGTAC 
ATCCCGGCGC TGGCCGCGCT GGGATTGCAG CCCTTCGGGC ACCTCGCCGA CGTGCCAGCC 
ATGGCCGCCG GTGGGGTGGT GCGCGCCACT CCGGGCGGCA CCATCGTCCG TCTGGCCGAA 
GCCGGACGTG ATGAGGCCGT CGTCGACGCC GGGCTGCTGA ACGCGCGCAT GCGAGAGCTG 
GAGGGCCTCA CCTCTCAGCA GGCGGTGTCG TTCAGCGCGC AGCAGCTGGC GGCGATGGCC 
GGCACCACGC GCCGGCAGGA CCAGCTGGCG CCGCTGCTGC GCGAGCTTAT CGACCTAGCC 
GGCGACGGCA ACGCCATCGC CCAGTCCGGT CTCGACCGGA TCTACGGGGC AGTGGAGGAC 
GGGCCGCGGC GCCATCAGCA GCTCACGAGG CAGGGAGGAG GCCGCTGA 

 

Protein sequence

MATYDAGRVV LTVWPSFAGV QERIGREAGK WGRDAGRAYQ TGFNREVAAA PTVNPGPSDA 
EAARLGNDAG KAYGNGFRSG VGSGGPAPVP GPSPSQSRQQ GQRSGGAYGD AFRAQLEQAT 
RSLPRIELPM ATTEAKQKIR DLRTDLERLS NQRIGIDVDA ATAEAEVERL LGQLRALNAA 
ATDVQVRADT AGAIAKLEGL QEQLRSLSGA TVDVDLEVQD GSFAARIRQA IERAQAALPR 
IEIDADSSDA EVEIQRIRGR LDALGSRRIG VDISAADAAA QITRLQGRLE RLQASTTDVR 
VNADAAAAAA ALAAVQAQVD RLNGSSARVD VDSTSINTFS GRLVLLGTAI ASIAPALLPI 
GGIAITSLGA IGAAATTAIP ALATLVLGFK GVGEALKQMG KVQDESAGLA DKNSEAAQQQ 
AQAQAAAARQ VESAEASLAN TRANVAEAEQ RTAQQIAQAQ QGVIKAREDA ARSAATAARQ 
VLDAQAGLAD AEEALAESVA AATKRVTDAR EAAARSAEAA ARRVADAERD LQDARQAADE 
AAVQDAKRVA DAREALARVT TDGAQRVQTA LRRQTDAERD YSDALRTERD LQRDLAQARK 
DAQDQLEDLS FRVRQGALDE KQAGLDLAEA RAEYEKAQTD GKATDASREQ ARIRFEEAKL 
QLEQLEVSNQ RLAEQQAEAN EEGVEGSDAV ASAQERIAAA VRAREDADRA AREAAAGVEA 
ARVEAANAVA DAEERLAEAS SARLKGQEDG ERRVSDAQRA LADALGAQTQ AQVNAAERIT 
EAEAARMEAQ EDGAERVAGA QQRAADAVAG AERTRLEGLE RIAQAQDTVS QAVTAQAEQQ 
RSAAFSLEQA ERSLAGARES AATAAAGGAV AATAAMRNLD TAMGKLSPLQ QEFTRFLFGL 
GPQLGVLQDA SAAGLLPGVQ RGIEALLPLM PTFERLALTF GTALGSLFER AGQSLAGPEF 
QRFYVFLETQ GPGILSSLGT LVGSVFSVFN GLAEAFGPIA AQTITSLAGL TQRFADFLHT 
AGDNESFQDF LRYVQENTPA VMEFLGSLTD AFVNIIRSMA PFGPVVLGVI GFLADMIAAV 
PPGVLAAIAL AVTGIVTAFT ILGPVIAFVS TIIAGISAGL PVLAVIIAAF GGPVTLIVAG 
VVALGAAFLA AWHHSETFRN AIYGIGDVFV WLWEKASWLG NMLFDGILWP FRNPGVIWDG 
IKSGFFFLLE AIKEFFGIHS PSTVFAEIGE FLILGLLSAF EGLQKRVHAA FIVVKQALLD 
VWGIVVDKVW NPIQTFLTVT LPGYYTTAVS GIARAWEWVK DTVRKPLDWL RDNVFAPYFT 
FYTVTLPGWF TTAVGFIGTE WGKYAKKITD PIDWLRDNVW NVFANFLTVK VPGFVASGVN 
LIGTEWAKYA KKITDPIDWL RDNVWNVFAN FVTVTLPGYF TTATDRIGAA WDMIKEKLKQ 
PIRFVIDTVI NQGIVDAFNW IAGKVGLPQD KQLQRFKLPE GFARGGVLAG QSSWRDGDDQ 
LVPMRRGEGV AVSEAMQVPE AREQLLTWNR LGVQGGASAV RQYMRGMQGY ARGGIVDLGR 
WFQGKGARVA EHPAFGGVSN VHRGRGHYEG RAIDVNRNGN NGSESDYEKE FFDRYANALK 
AAGWTVYWRV PGHFNHLHAE APTRSFEGAF PDGGILSAIG DLAAGAWDFL SGLNPIDYLK 
GKVGELMGSV PGAGAALDLA KAVPNKLLDV AGSSIMSLLS SVNPFDGSEN DTPSALGGTA 
AQNREVVRQR AALRGWGDGP QWAALDWLVN KESSYRNDVK NPTSTAYGLF QFLNGTWDDV 
GGRKTSDPGL QTDYGLRYIA QRYTDPIGAK RFHQKNGWYW GGGIIGQPEA HNLRPGPGKY 
IPALAALGLQ PFGHLADVPA MAAGGVVRAT PGGTIVRLAE AGRDEAVVDA GLLNARMREL 
EGLTSQQAVS FSAQQLAAMA GTTRRQDQLA PLLRELIDLA GDGNAIAQSG LDRIYGAVED 
GPRRHQQLTR QGGGR