| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1295 |
|---|
| Symbol | |
|---|
| ID | 5334649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 945194 |
|---|
| End bp | 946597 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | 1,4-alpha-glucan branching enzyme |
|---|
| Protein accession | YP_001361047 |
|---|
| Protein GI | 152965263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.948286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG ACGTCCGCAC CTCCGCCGCC TCCGACGAGG CCGTCGCCGC CCTGCTGCTC
GAGTGGGCCC CGGCTCAGCG GTGGTTCGCG CACAAGGGCG TCGCCGCCCA CGTGGAGCGC
ATCGAGCGCA CCCCCCTCGA CGAGGGCGGG GTGGCGCAGC TCGTCGCGCT CACCGTGCGC
TCCGGGGAGG GCGAGGACGC CCCGCGCACC GTCTACTCGG TGCCGATCAG CGTCCGCCCG
GCCCCCGACG AGGCCCTGGC CGCGGCCCTC GTCGGCGAGC TCCCCGACGT CGACGGGGCC
CGGGCCTGGG TCTACGACGG CCCGCACGAC CCGACGTGGA CGCGCGCGCT GCTGACCCTC
GTCGCCAGCG AGGAGGGGGC CGGCTCGCGC AGCTTCGGCG TCCACGGCAC CAGCGCCGAC
GGCGGGCTGC CCGTCCCGGC CGGGGCGCGC ACCAAGGTGC TGGGCGGGGA GCAGTCGAAC
ACCTCGATCG TCGTGGCCGC CGACGAGGGC GAGACCCCCC TCATCGCCAA GGTCTTCCGG
GTCCTCTCCG CCGGGGACAA CCCCGACGTC GTCGTGCAGA CCGCCCTCGC CGACGCCGGC
TGCGGGCGGG TCCCGCGCCC CTCGGGGTGG GTGGACGGCC ACTGGACCGA CGTCTCGGGC
GAGCGGGTCG CGGGCCACTT CGTCCACCTG ACGGAGTTCC TGGCCGGGTC CGAGGACGCC
TGGCGGGTCG CCACGGCGGC CGTGGCGCAG GGGCGCGACT TCTCCGCCGA GGCCCGCGAG
CTGGGCCGGG CCACCGCCGA GGTGCACGCC GTGCTCGCGG CGGAGCTGGC CACCGAGGAG
GCCACCCCGC AGCGGCTGGC GGCGCTGGCC GACGGCCTCC TGGAGCGGGT CGAGTGGGCC
ACCACGGCCG TCCCGCAGCT GCGCGAGGTG GCCGGGGCCG CCCGCGCCCG CGTCGACGCC
GTCCGCGGCG TCGCGCACGC CCCGGCGCTG CAGCGCGTGC ACGGGGACTA CCACCTGGGC
CAGGTCCTGC ACTCGGCCTC CCGGGGCTGG GTGCTGCTGG ACTTCGAGGG CGAGCCGCTG
CGGCCGCTGT CCGAGCGCAG CCTGCCCGAC CTCGCGCTGC GCGACGTCGC GGGGATGCTG
CGCTCCTTCG ACTACGCCGC CTCCACCGTG CCCGACCCGG GCGACTGGGG CCCCCGGGCC
CGGGAGGCGT TCCTCGACGG CTACGCCGAG GTCGTCGGCA CCGACCCGCG GCAGGGCGAG
CAGGCCGTGC TGCTGGCCGC CCTCGAGCTC GACAAGGCGC TCTACGAGGT CGTCTACGAA
GCCCGCAACC GGCCCGACTG GTTGCGCATC CCGCTGGACG CCGTGCACCG GTTGCTCCAG
TCCGCCTCCG CCGACCCGTC CTGA
|
|---|
| Protein sequence | MSADVRTSAA SDEAVAALLL EWAPAQRWFA HKGVAAHVER IERTPLDEGG VAQLVALTVR
SGEGEDAPRT VYSVPISVRP APDEALAAAL VGELPDVDGA RAWVYDGPHD PTWTRALLTL
VASEEGAGSR SFGVHGTSAD GGLPVPAGAR TKVLGGEQSN TSIVVAADEG ETPLIAKVFR
VLSAGDNPDV VVQTALADAG CGRVPRPSGW VDGHWTDVSG ERVAGHFVHL TEFLAGSEDA
WRVATAAVAQ GRDFSAEARE LGRATAEVHA VLAAELATEE ATPQRLAALA DGLLERVEWA
TTAVPQLREV AGAARARVDA VRGVAHAPAL QRVHGDYHLG QVLHSASRGW VLLDFEGEPL
RPLSERSLPD LALRDVAGML RSFDYAASTV PDPGDWGPRA REAFLDGYAE VVGTDPRQGE
QAVLLAALEL DKALYEVVYE ARNRPDWLRI PLDAVHRLLQ SASADPS
|
|---|
| |