| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1068 |
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| Symbol | |
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| ID | 5336046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | - |
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| Start bp | 1192384 |
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| End bp | 1195122 |
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| Gene Length | 2739 bp |
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| Protein Length | 912 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | Endo-1,4-beta-xylanase |
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| Protein accession | YP_001360820 |
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| Protein GI | 152965036 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0377061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAAC GACGTCTGCG AGCCGGTGCG CTCGCCACCG GCCTCCTCGC CGGGCTCGGC
ACCGTGGTGG CTCCCTCGGC CACGGCCGCT GCGGTCGACT ACACCGCCGG CTTCGAGTCC
GGCACCTCCG GCTGGACCGG CCGCGGCACC ACCGGGGTGG CCGTCAGCAC CGATCAGGCC
CACGGCGGCA GCAGCAGCCT GCTCGCCACC GGCCGCACCG CGAACTGGCA CGGGCCCGCC
CTGGACGCGC GCACCGTCAT GCCGGCCGGT CGGTACACGA TCGAGGCCTG GGTCCGGCTC
GTCGCCGGCA CGGGCGCCGA CACCGTGAGC CTGACCGTCG CCCGCACCCC CGACGGCGGC
GCCGCGGCCT ACGACTCCGT GGCGAACGGC GTCGCCGTCA CCGACAGCGG CTGGACCAGG
GTCAGCGGCA CCTACGAGTT CGCGACCGCG AACAACAGCC AGCTGGAGCT CTACCTGGAG
AGCCCCGACG CGACCCAGGC CTTCTACGTC GACGACGTCC GCATCACCGG TGAGACCGCG
GCCCCCGTCC AGCCCGGCAC CACCCCGCCC GTCACGACCG CCTTCGACGG CGGCCCCGAC
GGCTGGACCG CGCGCGGCGA CGCGACGGTC GCGCACGTGA CGGCCGGTGG CCGCAGCGGC
GGCGCCCTCA GCGTCAGCGG CCGGACCCAG ACCTGGCACG GCCCCGCCTT GGACGTGACG
CCCAACCTCG CGGTCGGGCG CACCGTCGAG GCCTCGGTGT GGGCCCGGCT CGCTCCCGGT
TCCGCGCCCG CCCAGCTGAC GCTCTCGATC CAGCGCGACC GCGCCGGTAC CCAGACCGCC
TACGAGAACA TCGCCGGCGC CGAGGTCACC GCCGACGCGT GGACGCGCAT CCGCGGCACC
TACACCCTGG GCTCCCCCGT CGACAGGGCG CAGGTCTACG TCGAGGGCAC CGCGGGGGCC
GCCTTCCTCA TCGACGACTT CACCCTCCAG CCCTTCGCCG AGACGCCCGT GCAGGACGTG
CCCGCGCTGA AGGACGTCCT CGGCGCGCAG GGCTTCGAGC ACGTCGGCGT CGCCCTCGAC
CAGCGCGAGA CCACCGGCCG GCCGGCCCAG CTCGTGCAGA AGCACTTCAA CGCCTTCACC
CCGGAGAACG ACGGCAAGCC GGAGAGCGTC CAGCCCACCG AGGGCACCTT CACCTTCGGC
AACCTCGACC GGCTGCTCGA CTTCGCGGAC GCCACCGGGA CCCAGGTGTA CGGCCACGTC
CTCGTCTGGC ACTCCCAGAC CCCCGCGTGG GTCTTCCAGC GCCCCGACGG CACCCCGCTG
ACGAACTCCC CGGCGGACCG GGCCCTGCTC GAGCAGCGCA TGGAGACCCA CATCAAGGCG
ATCGCGGACC ACGTGAACGC CCGCTACCCG GACGGGAACA GCCCGATCTG GGCGTGGGAC
GTCGTGAACG AGGTCATCGC CGACGGCGAC AACGCCAACC CGCACGACAT GCGCGACAGC
CGCTGGTTCC AGGTCCTCGG CGAGGGCTTC GTGGACCACG CCTTCCGCCT CGCGGACCAG
TACTTCCCGG ACGCGAAGCT GTTCATCAAC GACTACAACA CCGAGATGCC GGAGAAGCGA
GCCGACTACC TCGGCCTCGT CTCCTCCCTC ATCGAGCGGG GCGTGCCGAT CGACGGCGTC
GGGCACCAGG CCCACGTCGA CTTCGGCCGC CCCGTGCAGT GGCTGGACGA CTCCCTCACC
GCGGTCGAGG AGCTCAGCGC GCAGGAGGGG CACCCCCTGG CCCAGGTCAT CACCGAGCTG
GACGTGAGCA CCTCCACGGA GATGGCCTCG GCGGACGTCA ACAGCACCGG GGCACCCGAG
CGCGCCACCC CCGACGACGC CGCCGCCGGC GTGGAGAACG GCTACTACTA CCGCGACCTG
TTCGCCGCGC TGCGCGAGCA CTCCGGCTCG ATCGAGTCGG TGACGTTCTG GGGCATCAGC
AACGCCCGCA CCTGGCTGCG GACCTGGCCG TACCCCCGTC CGTGGGAGCG GCCGCTGCCC
TTCGACGACG ACCTGCAGGT CACCCCGGCG TACTGGGGCG TCGTCGACCC GTCGAAGCTG
CCCGCGCGCC CGGCGGACTT CCTGATCCCC CGCCTCGCCG CGAAGGACCC GGTGCGGGTG
TCCTCCACCA GCCCCGCGGG GGCGGAGGTC ACCTTCACCC CGCCGGTCGC CGGTGACACC
CGCGACGGCG TCCTCAGCCC GACGTGCACC CCGGCGTCCG GCTCGCAGTT CCCGATCGGC
ACCACCCGGG TGACGTGCAC GCTGACCGAC GAGGCCGGCA ACCAGGCCAC CCCGGGCGTG
TTCGACGTGG TCGTCACCCC GCCGCCCACC ACGACGAAGC TGTACCAGCG GGTCAACCAC
GGTCCGGTCG TGCGGGCGAA CGTGAACCAG ACCGTGCAGG TCGTGGTCCA GTTCGGCAAC
GAGGGCACCG GCACCCTGCT CGGGCGCACC TTCGGGCACT CCTGCACCCA GGTGAACGCC
GGTGCGGCGG GCTCGACCCC GCTGGCGCTG GAACTCGCCC CGGGCTCGGC GCACACGACC
CAGCGGAACT ACCCGGCCGG GCAGAACGGG AACTTCACCC TGCGGGCCCG CCCCACCAGG
ACCGGCACCG CGGTGCTCGA CTGCACCCTG TCCCTGCAGG ACTCCTTCGG GGCGCAGGTC
AGCACCACGA CCCGCATCAC GGTCGACGTC CGCAAGTGA
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| Protein sequence | MRQRRLRAGA LATGLLAGLG TVVAPSATAA AVDYTAGFES GTSGWTGRGT TGVAVSTDQA
HGGSSSLLAT GRTANWHGPA LDARTVMPAG RYTIEAWVRL VAGTGADTVS LTVARTPDGG
AAAYDSVANG VAVTDSGWTR VSGTYEFATA NNSQLELYLE SPDATQAFYV DDVRITGETA
APVQPGTTPP VTTAFDGGPD GWTARGDATV AHVTAGGRSG GALSVSGRTQ TWHGPALDVT
PNLAVGRTVE ASVWARLAPG SAPAQLTLSI QRDRAGTQTA YENIAGAEVT ADAWTRIRGT
YTLGSPVDRA QVYVEGTAGA AFLIDDFTLQ PFAETPVQDV PALKDVLGAQ GFEHVGVALD
QRETTGRPAQ LVQKHFNAFT PENDGKPESV QPTEGTFTFG NLDRLLDFAD ATGTQVYGHV
LVWHSQTPAW VFQRPDGTPL TNSPADRALL EQRMETHIKA IADHVNARYP DGNSPIWAWD
VVNEVIADGD NANPHDMRDS RWFQVLGEGF VDHAFRLADQ YFPDAKLFIN DYNTEMPEKR
ADYLGLVSSL IERGVPIDGV GHQAHVDFGR PVQWLDDSLT AVEELSAQEG HPLAQVITEL
DVSTSTEMAS ADVNSTGAPE RATPDDAAAG VENGYYYRDL FAALREHSGS IESVTFWGIS
NARTWLRTWP YPRPWERPLP FDDDLQVTPA YWGVVDPSKL PARPADFLIP RLAAKDPVRV
SSTSPAGAEV TFTPPVAGDT RDGVLSPTCT PASGSQFPIG TTRVTCTLTD EAGNQATPGV
FDVVVTPPPT TTKLYQRVNH GPVVRANVNQ TVQVVVQFGN EGTGTLLGRT FGHSCTQVNA
GAAGSTPLAL ELAPGSAHTT QRNYPAGQNG NFTLRARPTR TGTAVLDCTL SLQDSFGAQV
STTTRITVDV RK
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