| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0748 |
|---|
| Symbol | |
|---|
| ID | 5337800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 1537817 |
|---|
| End bp | 1539598 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter transmembrane region |
|---|
| Protein accession | YP_001360501 |
|---|
| Protein GI | 152964717 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0284601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCACCG GTGCCGGAAG CCGGTTACCG TCGTCCCTCG TGCGCTCTCT CCCCCTGAGC
GATCCCGGCA CCCCCGACGT CACCTCCCCC CTGCGCTTCC TGCTGCGCAC GGCCGCCCAG
CAGTGGCGGC CCATGGTGGT CGGCTCCGCG ATCGGGACCG TCTGGATGCT GTCGCAGGCC
GTGCTGCCCG CGGCCATCGG CCGCGCCGTC GACCTCGGCG TCGTCGCCGG GGACGCCGGC
GCCCTCACCC GGTGGTCCCT CGTCGTCCTC GCCCTCGCCG TCGTCACCGC GACGGCCGCG
GTCCTGCGCC ACCGCTTCGG GGTGACGAAC TGGCTCACCG CCTGCTTCCG CACCCTGCAG
CAGGTCGGGC GGCACAGCGC CCGCGCCGGG ACCGCGGTCA CCCGCGAGCT CCCGCAGGGC
GAGGTCCTCG CCTCCATCGC CTCCGACGGC CCGCGCCTGG CCGACGCCTT CGACGTCACC
CAGCGGGCCG TGGCCTCGGT CGCGGCGGTG GCCGTGGTGG CCGTCCTGGT GCTGCGGACC
TCGGTGCCCC TGGGCCTGGT CGTCCTCGTC GGGGTGCCGC TGGTGATGGC GGTGCTGCTG
TTCGTGCTGA AGCCGCTGCA GGCGCGCCAG CGCCTGCACC GCAAGCTGTC GGGCGAGCTG
ACCTCCATCG GCACCGACAC CGTGCGGGGG CTGCGGATCC TGCGCGGCAT CGGCGGCGAG
GAGGTCTTCC TCGGCCGCTA CCGCGCCAAG AGCCAGCAGG TGCGCGCCGC CGGGGTCCGG
GTGGCGACCT GGGAGTCGGC GCTGGAGGCG CTGCAGGTCC TCGTCCCGGG CCTGCTGGTG
GCCGCCCTGG TGTGGGCCGG GGCCCGGGCC GCGGTCCGCG GGGAGATCAC CGCCGGCGAC
CTCGTCGCCC TCTACGGCTA CGCGGCCTTC CTCACCTCCC CGCTGCGGAT GCTGGTGGAG
GCCGCCGACA AGTACGTCCG CGCCCTCGTC GCCGCCCGGC GCCTCACCAC CCTGCTCGAG
GTGCCGCCCG CGGTCACCGA CGACGGGCGC GCGAGCAGCC CCGGCGGCGA CCTCGCCGAC
CCCGACTCCG GCGTGGTCGT CCCCGCCGGC GGGCTGACGG CCCTCGTCTG CGACCCGCCC
GAGGACGCCG CCGAGCTGGC GCGGCGCCTC ACCCGCTTCG ACGACGCCAC CCGCGCCACC
TTCGGCGGGG TCGCCCTGCG CGACCTGCCG GTCGCCGAGG TCCGCCGCCG CGTGCTGCTG
GCCGAGGACG ACGCGCAGCT GTTCAGCGGC ACCCTGCGCG AGCAGGTCGA CCCCGAGGCC
CGCCACGGCG ACGCCGAGGT GCTGGAGGTC CTGCGGGTCG CCGACGCCCT CGACGTCCTC
GAGGCCGTCG ACGGCGGGCT GGCCGCCACC GTCACCGAGC GCGGCCGCTC GCTGTCGGGG
GGCCAGCGCC AGCGCCTGGC CCTGGCCCGG GTGCTGCTGC GCGAGCCCGA GGCCCTCGTC
CTCGTCGAAC CCACCAGCGC CGTCGACGCC CACACCGAGG CCCGCATCGC CCACCGGCTC
CGGACGGCCC GGGCCGGGCG CACGACCGTC GTCGCCACGG CCAGCCCGCT CGTCCTGCCC
CTGGTCGACT CGGTCTGCTG GGTGCGCGCG GGGCGCCTGG TGGCCCGCGG CCGCCACGGC
GACCTGCTGG CCACCGACCC CGACTACCGC CGCTACGTGA CCCGCGACGC GACGCTGCCG
CCCCCGCGGC GGCCCGTCGC CCTGGAGGAG GAGACGGCGT GA
|
|---|
| Protein sequence | MGTGAGSRLP SSLVRSLPLS DPGTPDVTSP LRFLLRTAAQ QWRPMVVGSA IGTVWMLSQA
VLPAAIGRAV DLGVVAGDAG ALTRWSLVVL ALAVVTATAA VLRHRFGVTN WLTACFRTLQ
QVGRHSARAG TAVTRELPQG EVLASIASDG PRLADAFDVT QRAVASVAAV AVVAVLVLRT
SVPLGLVVLV GVPLVMAVLL FVLKPLQARQ RLHRKLSGEL TSIGTDTVRG LRILRGIGGE
EVFLGRYRAK SQQVRAAGVR VATWESALEA LQVLVPGLLV AALVWAGARA AVRGEITAGD
LVALYGYAAF LTSPLRMLVE AADKYVRALV AARRLTTLLE VPPAVTDDGR ASSPGGDLAD
PDSGVVVPAG GLTALVCDPP EDAAELARRL TRFDDATRAT FGGVALRDLP VAEVRRRVLL
AEDDAQLFSG TLREQVDPEA RHGDAEVLEV LRVADALDVL EAVDGGLAAT VTERGRSLSG
GQRQRLALAR VLLREPEALV LVEPTSAVDA HTEARIAHRL RTARAGRTTV VATASPLVLP
LVDSVCWVRA GRLVARGRHG DLLATDPDYR RYVTRDATLP PPRRPVALEE ETA
|
|---|
| |