Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0642 |
Symbol | |
ID | 5337312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1638402 |
End bp | 1639064 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | putative GAF sensor protein |
Protein accession | YP_001360395 |
Protein GI | 152964611 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.344315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000370263 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCGGACG CTGGAACGGA CCGGAGGTGG GGTGCGGTGA GCGAGCACCG GGAGCAGGAG CGGGAGCGGG ATCAGGTGTC GCAGAACGAG TGGGTCCACT GGCTCGAGGA GGTCCTGGAG AGCGCCCCGG CCGAGGAGGA CGACGTCCTG TTCGCGCCCG CGCGGCTGGG CGCGATCGCC GCCCTCGGCG CCGACGACGT CGAGCGCGTG CAGCCCCTGG TGGGGGAGCT GCTCACCGGG GCCGCCCAGG ACGTCGGGAC CCCCGTGAGC CTGGCCAACG TCGTCCTGTC CGGGGTGCAG GTCATCGCCG GCGAGCACGG CCTGGCGGGC TGGATGGCGC AGGCGCGGGC GACCCCGGCG GAGTGGTCGC TGTGCGCCAC GGTCGTGCGC CGCGGTGAGG CGTACGTCGT GCCGGACATG GCCGCGGACG AGGCGACCGC GCAGAACCCG CTGCACCTCG TCGACGGGTT CCGCTCCTAC GCGGGCGTCC CGCTGACCGC GCCGGACGGG CAGGTCATCG GCTCGGTGTG CGTGCTGGAC ACCGAGGTGC GCCGCTACTC CGAGGCCGAC CTCGACGTCC TGCGCGCGGT GGCCGCCGAG ACCACCCGCC GGATGGCGGG CGCGGGCGAG GTCACCCCGG GGACCGGGGC CCCCGCGGCC TGA
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Protein sequence | MADAGTDRRW GAVSEHREQE RERDQVSQNE WVHWLEEVLE SAPAEEDDVL FAPARLGAIA ALGADDVERV QPLVGELLTG AAQDVGTPVS LANVVLSGVQ VIAGEHGLAG WMAQARATPA EWSLCATVVR RGEAYVVPDM AADEATAQNP LHLVDGFRSY AGVPLTAPDG QVIGSVCVLD TEVRRYSEAD LDVLRAVAAE TTRRMAGAGE VTPGTGAPAA
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