| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0375 |
|---|
| Symbol | |
|---|
| ID | 5333759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 1927658 |
|---|
| End bp | 1928266 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_001360129 |
|---|
| Protein GI | 152964345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00856394 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.419772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGACGAG TGCAGACGTT CGACACCGAC GAGGTCGTGC GCGCGGTGCG CGCCCTCTTC
TGGGAGCGCG GCTTCGAGGG GGTGTCCGTC CCCGACCTCG AGACCGCCAC CGGCGTCGGG
CGCTCCAGCC TCTACCACGC CTTCGGCAGC AAGCGCGGGC TGTTCGACGC CGCCGTGCGC
AGCTACCTCG AGGAGGTCGT CCGGCCCCGG CTGCGCCCGC TCACCCTCGA CCCCGTCGAC
CCGGGTGCGC TGCCCGCCTA CCTGCACGGG GTGCGGACGG TGCTGGCCGA GGGCCGGGCC
CCGGCCCTGC GCAGCGGGTG CCTGCTGCTC AACGCCGCGA CCTCACCCAT CGGCCGTGAC
GAGGCCGTCG CCGGGGCCGT CCTCGGCTAC CGCGCCGAGC TGCACACCGC CCTCGCGCGC
GGTGTCGCGG CCCACCTCCC CGGGCTGCCG GCCGAGGAGG CCGGGCAGCT CGCCACCCTG
TGCACCGCGA GCGTCCTCAG CGCGATGGTC CTCGCCCGCG TCGACCCCGC CGAGGCCGCG
CGCACCGTCG ACGCCGCCCT CGCGCTGCTG CGCGCCCGGC TCAGCCCGGG CGCCGGCTCA
CGACCATGA
|
|---|
| Protein sequence | MGRVQTFDTD EVVRAVRALF WERGFEGVSV PDLETATGVG RSSLYHAFGS KRGLFDAAVR
SYLEEVVRPR LRPLTLDPVD PGALPAYLHG VRTVLAEGRA PALRSGCLLL NAATSPIGRD
EAVAGAVLGY RAELHTALAR GVAAHLPGLP AEEAGQLATL CTASVLSAMV LARVDPAEAA
RTVDAALALL RARLSPGAGS RP
|
|---|
| |