| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6206 |
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| Symbol | soxA |
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| ID | 5354341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 6410883 |
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| End bp | 6413900 |
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| Gene Length | 3018 bp |
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| Protein Length | 1005 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640815250 |
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| Product | sarcosine oxidase subunit alpha |
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| Protein accession | YP_001351517 |
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| Protein GI | 152985384 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA TCAATCGCCT GTCCAGCGGC GGCCGCATCG ACCGCGAGCG CCCGCTGACC
TTCAGCTTCA ACGGCCAGCA CTACCAGGGC TATGCCGGCG ACAGCCTGGC CGCCGCGCTG
CTGGCCAACG GCGTCGACAT CGTCGGCCGC AGCTTCAAGT ACTCGCGGGC GCGCGGCATC
GTCGCCGCCG GTGCCGAGGA GCCCAACGCG ATCCTGCAGA TCGGCTCCCG CGAAGCCACC
CAGATCCCCA ACGTGCGCGC CACCCAGCAG GCCCTCTACG GCGGCCTGGT GGCCACCAGC
ACCAACGGCT GGCCGAACGT GCAGAACGAC CTGATGGGAA TCTTCGGCAA GGTCGGCGGC
AAGCTGATGC CGCCCGGTTT CTACTACAAG ACCTTCATGT ACCCGCAGTC GATGTGGATG
ACCTACGAGA AGTACATCCG CAAGGCCGCC GGCCTGGGCC GCGCGCCGAC CGAGGTCGAT
CCGGACAGCT ACGACTGGAT GAACCACCAC TGCGACGTGC TGGTGGTCGG CGCCGGCCCG
GCCGGCCTGG CCGCCGCCCT CGCCGCCGCT CGCAGCGGCG CGCGGGTGAT CCTCGCCGAC
GAACAGGAAG AATTCGGCGG CAGCCTGCTG GACACCCGCG AGACCCTCGA CGGCAAGCCC
GCCGCCGAGT GGGTCGCGGA CGCCGTGGCC GAGCTGCGAG GCCTGCCGGA AGTCATCCTG
CTGCCGCGCT CCACGGTCAA CGGCTACCAC GACCACAACT TCCTCACCAT CCACGAGCGA
CGCACCGACC ACCTCGGCGA GGTCGCCCCG CTCGGCCAGG TTCGCCAGCG CGTGCACCGC
GTGCGCGCCA AGCGCGTGGT GCTGGCCGCC GGCGCCCATG AGCGGCCGCT GGTCTACGGC
AACAACGACC TGCCCGGCAA CATGCTCGCC GGCGCGGTTT CCACCTATGT ACGGCGCTAC
GGCGTGGCTC CGGGCAGGAA ACTGGTGCTG GCCACCAACA ACGACTACGC CTACCGCGTC
GCCCTCGACT GGCAGGAAGC CGGCCTGCAC GTGGTGGCCA TCGCCGACGC ACGGGCCAAT
CCGCGCGGCG AGTGGGTCGA GGAAGCACGC CAACGCGGCA TGCGGGTGAT CACCGGCAGT
TCGGTGATCG AGGCTCGCGG CGGCAAGCGG GTCAGCGGCG CCAAGGTCGC CCGGATCGAC
CTGCAGGCCA TGCGCGCCAG CGGCGGCGAA TGGCTGGACT GCGACCTGAT CGCCAGCTCC
GGCGGCTACA GCCCGGTCGT GCACCTGGCC TCGCACCTGG GCGGCAAGCC GCAATGGCGC
GAGGAAATCC TCGCCTTCGT CCCCGGCGAA GGCCTGCAGA AGCGCATCTG CGCCGGCGCC
GTGAACGGCG TGTTCGGGCT CGCCGAGGTA CTCGCCGACG GCTACCAGGC CGGCGGCCGC
GCCGCCCTCG ACGCCGGCTA CAAGACCGCC GCCGGCAGCC TGCCGAAGGT CCAGCCACGC
CGCGAGGAAG CGCCCGTCGC GCTGTTCCAG GTGCCCCACG AGAAGCCCAC GGCGCGCGCG
CCGAAGCAGT TCGTCGATCC GCAGAACGAC GTCACCGCCG CCGCCATCGA ACTGGCCTGC
CGCGAGGGCT TCGAGTCCAT CGAGCACGTC AAGCGCTACA CCGCGCTGGG CTTCGGCACC
GACCAGGGCA AGCTGGGCAA CATCAACGGC CTGGCGATCG CCGCGCGGGC CCAGGGCAAG
AGCATCGCCG ACACCGGCAC CACCATGTTC CGCCCGAACT ACACCCCGGT GACCTTCGGC
GCCGTCGCCG GCCGCCACTG CGGGCACCTG TTCGAACCGG TGCGCTTCAC CGCCCTGCAC
GCCTGGCACG TGAAGAACGG CGCCGAGTTC GAGGACGTCG GCCAGTGGAA GCGGCCGTGG
TACTTCCCGC GCCGCGGCGA GGACATGCAC GCCGCCGTGG CCCGCGAATG CCGCGCGGTG
CGCGAGGCGG TCGGCCTGCT CGACGCCTCG ACCCTGGGCA AGATCGACAT CCAGGGCCCG
GACGCGCGGG AGTTCCTCAA TCGGGTCTAC ACCAACGCCT GGACCAAGCT CGACGTCGGC
AAGGCGCGCT ACGGCCTGAT GTGCAAGGAA GACGGGATGG TCTTCGACGA CGGCGTGACC
GCCTGCCTGG CCGACAACCA CTTCGTCATG ACCACCACCA CCGGCGGCGC CGCCCGCGTG
CTGGAGTGGC TGGAGCTGTA CCACCAGACC GAATGGCCGG AACTGAAGGT GTACTTCACC
TCGGTCACCG ACCACTACGC GACCCTCACC CTGTCCGGCC CGAACAGCCG CAAGCTGCTC
GCCGAAGTCA CCGACATCGA CCTGGACAAG GACGCCTTCC CCTTCATGAC CTGGAAGGAA
GGCAAGGTCG CCGGGGTGCC GGCGCGGGTG TTCCGCATCT CCTTCACCGG CGAGCTGAGC
TACGAGGTGA ACGTCCAAGC CGACTACGCC ATGGGCGTGC TCGAAGCGCT CGCCGAGCAC
GGCGCGAAGT ACGGCCTGAC GCCCTACGGC ACCGAGACCA TGCACGTCCT GCGCGCCGAG
AAGGGCTTCA TCATCGTCGG CCAGGACACC GATGCCTCGG TCACCCCGGA CGATCTCAAC
ATGGGCTGGG CGGTGGGCCG CAGCAAGCCG TTCTCCTGGA TCGGCTGGCG CGGCATGAAC
CGCGCCGACT GCCTGCGCGA GGAGCGCAAG CAACTGGTCG GTCTCAAGCC GAGCAACCCG
CAGGAGGTAC TGCCCGAAGG CGCGCAGCTG GTGTTCGACA CCCAGCAGGC GATCCCGATG
AAGATGGTCG GCCACGTCAC CTCCAGCTAC ATGAGCGCCA GCCTCGGCCA CGGCTTCGCC
CTGGCGGTGG TGAAGGGCGG CCTCAAGCGC ATGGGCCAGA AGGTCTACGC GCCGCTGGCG
GACGGCCGCT TCATCGAGGC GGAGATCTGT TCCTCGGTGT TCTACGACCC GAAAGGGGAA
CGGCAGAACG TGGATTGA
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| Protein sequence | MSQINRLSSG GRIDRERPLT FSFNGQHYQG YAGDSLAAAL LANGVDIVGR SFKYSRARGI
VAAGAEEPNA ILQIGSREAT QIPNVRATQQ ALYGGLVATS TNGWPNVQND LMGIFGKVGG
KLMPPGFYYK TFMYPQSMWM TYEKYIRKAA GLGRAPTEVD PDSYDWMNHH CDVLVVGAGP
AGLAAALAAA RSGARVILAD EQEEFGGSLL DTRETLDGKP AAEWVADAVA ELRGLPEVIL
LPRSTVNGYH DHNFLTIHER RTDHLGEVAP LGQVRQRVHR VRAKRVVLAA GAHERPLVYG
NNDLPGNMLA GAVSTYVRRY GVAPGRKLVL ATNNDYAYRV ALDWQEAGLH VVAIADARAN
PRGEWVEEAR QRGMRVITGS SVIEARGGKR VSGAKVARID LQAMRASGGE WLDCDLIASS
GGYSPVVHLA SHLGGKPQWR EEILAFVPGE GLQKRICAGA VNGVFGLAEV LADGYQAGGR
AALDAGYKTA AGSLPKVQPR REEAPVALFQ VPHEKPTARA PKQFVDPQND VTAAAIELAC
REGFESIEHV KRYTALGFGT DQGKLGNING LAIAARAQGK SIADTGTTMF RPNYTPVTFG
AVAGRHCGHL FEPVRFTALH AWHVKNGAEF EDVGQWKRPW YFPRRGEDMH AAVARECRAV
REAVGLLDAS TLGKIDIQGP DAREFLNRVY TNAWTKLDVG KARYGLMCKE DGMVFDDGVT
ACLADNHFVM TTTTGGAARV LEWLELYHQT EWPELKVYFT SVTDHYATLT LSGPNSRKLL
AEVTDIDLDK DAFPFMTWKE GKVAGVPARV FRISFTGELS YEVNVQADYA MGVLEALAEH
GAKYGLTPYG TETMHVLRAE KGFIIVGQDT DASVTPDDLN MGWAVGRSKP FSWIGWRGMN
RADCLREERK QLVGLKPSNP QEVLPEGAQL VFDTQQAIPM KMVGHVTSSY MSASLGHGFA
LAVVKGGLKR MGQKVYAPLA DGRFIEAEIC SSVFYDPKGE RQNVD
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