| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5827 |
|---|
| Symbol | hutH2 |
|---|
| ID | 5358836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 6018935 |
|---|
| End bp | 6020467 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640814872 |
|---|
| Product | putative histidine/phenylalanine ammonia-lyase |
|---|
| Protein accession | YP_001351146 |
|---|
| Protein GI | 152987502 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2986] Histidine ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG TAGCGAGCGT GGTGTTCGGC GACCGGCCTC TGCGCTGGCA GGAGGTGGTC
GCGGTGGCGC GGCATGGCGC GCGCCTGGAA CTCTCGGCGG AGGCCTGGGC GCGGATCGAC
AACGCCCGCG CCATCGTCCG GCGCATAGTC GCCAGCGGCG AGCGCGCCTA CGGTATCAGC
ACTGGCCTGG GCGCGCTGTG CAACGTCCTG CTGGAGGGCG AGCAGCTCGC CGAGCTGTCG
CGCAATACCT TGCTCAGCCA CGCCTGCGGG GTCGGCGAGC CGCTGCGCGA CGAGCAGACC
CGGGCGATCA TCTGCGCCGC CATCGCCAAC TACAGCCAGG GCAAGTCGGG GCTCGACCGT
TCGCTGGTGG AAGCGCTGCT GGCGCTGCTC AACCACGGCA TCACGCCGCG GGTGCCGGCG
CAGGGCTCGG TGGGCTACCT GACCCACATG GCGCACATCG GCATCGCCCT GCTCGGCGTC
GGCGAGGTCA GCTACCGTGG CGAGGTGGTG CCGGCCGCCG CGGCGCTGGC GGCGGAGGGC
CTGTCGACGG TGCGCCTGGG CGCCAAGGAC GGGCTGTGCC TGGTCAACGG CACGCCGTGC
ATGACCGGTC TCGCCTGCCT GGCGCTGGAC GACGCGCAGC GCCTGGCGCA GTGGGCCGAC
GTGATCGGGG CGATGAGCTT CGAGGCCCTG CGCGGGCAAC TGGCGGCGTT CGACGCCGAG
ATCATCGCCC TCAAGCCGCA TCCCGGGATG CAGCGGGTCG GCGCCAACCT GCGCGCCCTG
CTGGCCGGCA GCGAGGTGCT GGAAAGCGCC CGCGGCATCC GTACCCAGGA CGCCCTGAGC
ATCCGTTCGA TCCCGCAGAT CCACGGCGCC TGCCGCGACC AGCTGGCCCA CGCGGCGCGG
CAGGTCGAGA CCGAACTCAA CTCGGCCACC GACAATCCGC TGCTGCTGGG CACGCCGCAA
GCCTACCGGG TGGTGTCGCA GGCCAACCCC CACGGCGAGT CGGTGGCGAT GGCCGCCGAC
CTGCTGGCGA TCGCCGTGGC CGAGCTGGGC GGGGTCGCCG AGCGCCGCGT GGATCGCCTG
GTCAACCCGC TGGTCAGCGG CCTGCCGGCC TTCCTGGTGG GCAAGCCGGG GGTCAACTCG
GGGATGATGA TCACCCAGTA CGTCGCCGCC TCCCTGGCCG GCGAGAACCG CCAGCTGGCG
CAACCGGCGG TGGTCGACAA CTTCGTCACC TCGGGCCTCC AGGAAGACCA CCTGAGCCTC
GGCACCAGCG CCGCGCTCAA GCTCGGCAGG GCCCTGGAGA ACCTCCGGCG GATCCTCGCC
ATCGAGTACC TGCTGGCCGC CCAGGCCTTC GAGTTCCTCG CCCCGCAGCG CCGCGGCCAG
GGCACCGCGG CGGCCTGGGG CATCCTGCGC GAGCGCGTGC CCGCGTACGA CACCGACCGC
TGGCTGGCCC CCGACATCGC CAGCGCGGCG GCCATCCTCG GCGAGCAGAG CAGCCTCGCC
CGGGTGGCCG CGAGCATAGG AGACCTGCAA TGA
|
|---|
| Protein sequence | MSGVASVVFG DRPLRWQEVV AVARHGARLE LSAEAWARID NARAIVRRIV ASGERAYGIS
TGLGALCNVL LEGEQLAELS RNTLLSHACG VGEPLRDEQT RAIICAAIAN YSQGKSGLDR
SLVEALLALL NHGITPRVPA QGSVGYLTHM AHIGIALLGV GEVSYRGEVV PAAAALAAEG
LSTVRLGAKD GLCLVNGTPC MTGLACLALD DAQRLAQWAD VIGAMSFEAL RGQLAAFDAE
IIALKPHPGM QRVGANLRAL LAGSEVLESA RGIRTQDALS IRSIPQIHGA CRDQLAHAAR
QVETELNSAT DNPLLLGTPQ AYRVVSQANP HGESVAMAAD LLAIAVAELG GVAERRVDRL
VNPLVSGLPA FLVGKPGVNS GMMITQYVAA SLAGENRQLA QPAVVDNFVT SGLQEDHLSL
GTSAALKLGR ALENLRRILA IEYLLAAQAF EFLAPQRRGQ GTAAAWGILR ERVPAYDTDR
WLAPDIASAA AILGEQSSLA RVAASIGDLQ
|
|---|
| |