| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5194 |
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| Symbol | pilY1 |
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| ID | 5356713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5339482 |
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| End bp | 5342949 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640814240 |
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| Product | type 4 fimbrial biogenesis protein PilY1 |
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| Protein accession | YP_001350526 |
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| Protein GI | 152984932 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.948738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGG CACTCCACCA GATCGGCAAG ACCTCGCTGG CCGCCGCGCT CAGCGGCGCC
ATCCTGCTTT CCGCCCAGAC CACCCAGGCC GCCGCGCTGT CGGTCAGCCA ACAGCCGCTG
ATGTTGGTCC AGGGTGTCGC TCCCAACCTG CTGGTCACAC TGGACGACTC CGGCAGCATG
GCATTCGCCT ACGCCCCGGA CAGTATCTCC AGCTACAGGG ACTCCACGTT CTTCGCTTCG
AACAGCTTCA ACCCGATGTA CTTCGATCCA AACACCGAAT ACAAGCTGCC GAAGAAGCTC
ACGCTGGTTA ACGGCCAGGT ACAGATACAG GACTATCCCG CCCCCAGCTT CACCTACGCC
TGGCGCAACG GTTTCACGCG CGCGGGAGGT ATCGATCTAT CGCGCAACTA CAAGGTCACC
GTAGAGTACG GCCGAGGTTA TGACCGGGAA TCGACTATCA GGCCCGCCGC AGCCTTCTAT
TACGAGTTCA CCGGCTCGTC CAACTGCAGC CGCACCAACC AGAACTGCTA TACCCGTCGC
TCCGTGAGCA CAGAACAGCG ACAGAACTTC GCCAACTGGT ACTCCTTCTA CCGCACCCGC
GCCCTGGCCA CCCAGACCGC AGCCAACCTG GCGTTCTACA GTCTGCCGGA GAACATCCGG
GTAAGCTGGC AGATGCTGAA CAACTCCTCC TGCAACCAGA TGGGTAGCGG TTCCAGCAAT
GGCAATTGCT TCAACAACTA TCTGAGGGAC TTCAACGGTC AGCACCGAGT GAATTTCTTC
AACTGGCTGG AAAACCTCTC AGTAGAGGGA GGCACGCCAT TACGGCGTGC GATGACTCGT
GCTGGCGACT TCCTGCGCAG AACCGGCGTG AACGGCCCCT ACGCTTACCG CCCCGGCGAA
CAGACCGCAC CAGAATATAG CTGCCGCGGT TCCTACCATA TCCTGATGAC CGACGGTCTC
TGGAACAGCG ATTCCGCTAA CGTGGGCAAT GCAGACAGCA ACAGCAGGAC CCTTCCCGAC
GGGCAACATT ACAGCAGCCA GGCGCCGTAC AAGGACAATG CCTCCAATAC CCTCGCCGAT
CTGGCATTTC ACTATTGGGC CAATGACGCC AGGCCCGATA TCGAAGACAA TCTGAACCCT
TTCATTACCT ACCCCGACAA GGCCAACCCC TCGGCAGAAT ATTGGAACCC GCGTAACGAC
CCTGCTACGT GGCAGCACAT GGTCACCTAC ACCCTTGGCC TGGGATTGAC CACGACCCTC
ATTAGCCCGA AATGGGAAGG CTCTACCTAT GCCGGCGGCT ACCAGGATAT CCAGGCGGGC
CGCCTGAACT GGCCCAGCGC CGCTGTAGAC AGTGCCAATA ATGTCTATGA TCTATGGCAC
GCAGCGGTCA ACTCGCGGGG AGAATTCTTC AGCGCCGACT CTCCGGATCA ATTGGTTGCA
GCCTTCCAGG CTATCGTGAA CCGAATCTCC GGCGGCCCCT TGCCAGCCTC ACGTCCGGCC
ATTAGCTCGT CACTGCAGGA AGATGCAACC GGCGACAAGC AGATCCGCCA CGCCTACCAG
ACCAGCTTCG CCAGTGACCA GAACTGGGCA GGGGACCTGA CTCGCTACAG CCTGACCAGT
CAGGACAAGG TTACCGTGCA GACCAAGCTG TGGAGCGCGC AGGCCATCCT CGACGCGATG
CCCAACGGCG GCGCGGGACG CAAGATCATG ATGGCCGGCT CCGGCAGCAA CGGACTCAAG
GAGTTCTCCT GGACCAGCCT CAGCGCCGAC CAGCAGCGAC AACTGAACCG CGATCCGGAC
CGCAACGACG TCGCCGACAG CAAGGGCCAG GACCGCGTGG CCTTCCTGCG TGGCGACCGC
AGCAAGGAAA ACAGCGACAA CTTCCGCACC CGCAACTCGA TCCTCGGCGA CATCATCAAC
TCCTCGCCGG CGACCGTGGC CAAGGCCCAG TACCTCACCT ACCTGGCCCA GCCGATCGAG
CCCAGCGGCA ACTACGCGCA GTTCGCCGAA GCGCAGAAGA CCCGCGCACC GCGGGTCTAT
GTCGGCGCCA ACGATGGCAT GCTGCACGGC TTCGATACCG ACGGCAACGA AACCTTCGCC
TTCATCCCCT CCGCGGTCTT CGAGAAGCTT CATAAGCTGA CCGCCCGCGG CTACCAGGGT
GGCGCGCACC AGTTCTACGT GGACGGCTCG CCGGTGGTCG CCGACGCCTT CTTCGGCGGC
GCCTGGCATA CCGTGCTGAT CGGCAGCCTG CGCGCCGGCG GCAAGGGCCT GTTCGCCCTC
GACGTGACCG ACCCCGGCAA CATCAAGCTG CTCTGGGAGC TAGGCGTCGA CGAGGAGCCC
GACCTCGGCT ACAGCTTCCC CAAACCGACG GTGGCCCGCC TGCACAACGG CAAGTGGGCG
GTGGTCACCG GCAACGGCTA TTCCAGCCTG AACGACAAGG CCGCGCTGCT CATCATCGAC
CTGGAGACCG GGGCCGTTAC CCGCAAGCTG GAAGTCACCG GCAAGGCCGG CGTGCCCAAC
GGCCTGTCCA CTCCCCGGCT GGCCGACAAC AACAGCGACG GCGTTGCCGA CTACGCCTAC
GCCGGAGACC TGCAGGGCAA CCTCTGGCGC TTCGACCTGA TCGCCGGCAA GGTCGACCAG
AACGATCCGT TCAGCCGCGC CAACGACGGC CCGGCGGTGG CCTCCAGCTT CAAGGTTTCC
TTCGGCGGCC AACCACTTTA CTCGGCGGTC GACTCGAACG GCGCGGCGCA GGCGATCACC
GCCGCCCCCT CGCTGGTGCG CCATCCGACG CGCAAGGGCT ATATCGTGAT CTTCGGCACC
GGCAAGTACT TCGAGAACAG CGACGCCCGC GCCGATACCA GCCGCGCCCA GACGCTCTAC
GGCATCTGGG ACCAGCAGAC CAAGGGCGAG GCGGCAGGCA GTACGCCGCG CCTGAGCCGC
GGCAACCTGC GGCAGCAGAC CCTGGACCTG CAGGCGGACT CGACCTTCGT CTCGACAGCC
CGTACCATCC GCCTCGCCAG CCAGCATCCG GTCGATTGGC AAAGCCAGTC CGGCTGGTAC
CTCGACTTCA TGGTCAACGG CACCCTCAAG GGCGAGATGC TGATCGAGGA CATGATCGCC
ATCGGCCAGG TGGTGCTGCT GCAGACCATC ACCCCGAACG ACGATCCCTG TAACGATGGG
GCCAGCAACT GGACCTACGG CCTCGACCCG TATACCGGCG GCCGCACCAA TTTCACGGTG
TTCGACCTGG CCCGCCAGGG CGTCGTGGAC TCGAAGTCCG ACTACAGCTA CAACAAGCAG
AACGTGGTGG TCTCCGGCAC CGAGCAGAAA GGCCTCGGCG GCCTGACCCT GAGCACCAAC
GAACAGGGCA ACCCGGAAGT CTGCTCCTCG GGCGAATGCC TGACCGTGAA CCCCGGACCG
AACACCCGTG GCCGCCAGAA CTGGCGTCCC ATCGAAGGAA AGAACTGA
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| Protein sequence | MKSALHQIGK TSLAAALSGA ILLSAQTTQA AALSVSQQPL MLVQGVAPNL LVTLDDSGSM
AFAYAPDSIS SYRDSTFFAS NSFNPMYFDP NTEYKLPKKL TLVNGQVQIQ DYPAPSFTYA
WRNGFTRAGG IDLSRNYKVT VEYGRGYDRE STIRPAAAFY YEFTGSSNCS RTNQNCYTRR
SVSTEQRQNF ANWYSFYRTR ALATQTAANL AFYSLPENIR VSWQMLNNSS CNQMGSGSSN
GNCFNNYLRD FNGQHRVNFF NWLENLSVEG GTPLRRAMTR AGDFLRRTGV NGPYAYRPGE
QTAPEYSCRG SYHILMTDGL WNSDSANVGN ADSNSRTLPD GQHYSSQAPY KDNASNTLAD
LAFHYWANDA RPDIEDNLNP FITYPDKANP SAEYWNPRND PATWQHMVTY TLGLGLTTTL
ISPKWEGSTY AGGYQDIQAG RLNWPSAAVD SANNVYDLWH AAVNSRGEFF SADSPDQLVA
AFQAIVNRIS GGPLPASRPA ISSSLQEDAT GDKQIRHAYQ TSFASDQNWA GDLTRYSLTS
QDKVTVQTKL WSAQAILDAM PNGGAGRKIM MAGSGSNGLK EFSWTSLSAD QQRQLNRDPD
RNDVADSKGQ DRVAFLRGDR SKENSDNFRT RNSILGDIIN SSPATVAKAQ YLTYLAQPIE
PSGNYAQFAE AQKTRAPRVY VGANDGMLHG FDTDGNETFA FIPSAVFEKL HKLTARGYQG
GAHQFYVDGS PVVADAFFGG AWHTVLIGSL RAGGKGLFAL DVTDPGNIKL LWELGVDEEP
DLGYSFPKPT VARLHNGKWA VVTGNGYSSL NDKAALLIID LETGAVTRKL EVTGKAGVPN
GLSTPRLADN NSDGVADYAY AGDLQGNLWR FDLIAGKVDQ NDPFSRANDG PAVASSFKVS
FGGQPLYSAV DSNGAAQAIT AAPSLVRHPT RKGYIVIFGT GKYFENSDAR ADTSRAQTLY
GIWDQQTKGE AAGSTPRLSR GNLRQQTLDL QADSTFVSTA RTIRLASQHP VDWQSQSGWY
LDFMVNGTLK GEMLIEDMIA IGQVVLLQTI TPNDDPCNDG ASNWTYGLDP YTGGRTNFTV
FDLARQGVVD SKSDYSYNKQ NVVVSGTEQK GLGGLTLSTN EQGNPEVCSS GECLTVNPGP
NTRGRQNWRP IEGKN
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