Gene PSPA7_5189 details

Gene Information

• Locus tag: PSPA7_5189
• Symbol: fimT
• ID: 5358925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5336396
• End bp: 5336905
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640814235
• Product: type 4 fimbrial biogenesis protein FimT
• Protein accession: YP_001350521
• Protein GI: 152983682
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4970] Tfp pilus assembly protein FimT
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGAAA GGTCGCAGAG TGCGTTCACC CTCCCCGAGC TGCTGCTCAC GCTGACGCTA 
CTGGGAATCT TGGCAAGCCT TGCGCTGCCC GGGTTGGAGG GCTGGCTGGC TGGAAACCGC 
CAGCAGGCCC TGCTGCACGA ACTGAGCGCG AGCATTCAGC TGGGCCGCGC GCATGCCGTC 
ACCCATCGAC GCCCGGTGGC GCTCTGTCCT TCGAGCGATG GCCGGGGTTG CGGCGGCGAC 
TGGGGACAAG GCTGGCTGCT CGCCGAAGAG GACGCTGGCC TGGTGCTCGC CCGGCGCCAG 
TTGCCGACGC CGGAAGCGAT CCGCTGGAAC CGTTCGAATA CCCTGCGCTT CCTCCCCAGC 
GGCCAGCTCA ACGTACACAA CGGCCGGTTT CTGCTCTGCG GGAGAAACGG CGTCGCCTGG 
CAACTGGTCC TCAATCGCCA GGGTCGCCTC CGCGCCGCGA CCGCGCAGGA GAACCGGGAG 
AAACGTGAGC TATGCGGCAC TTCGGAATGA 

 

Protein sequence

MVERSQSAFT LPELLLTLTL LGILASLALP GLEGWLAGNR QQALLHELSA SIQLGRAHAV 
THRRPVALCP SSDGRGCGGD WGQGWLLAEE DAGLVLARRQ LPTPEAIRWN RSNTLRFLPS 
GQLNVHNGRF LLCGRNGVAW QLVLNRQGRL RAATAQENRE KRELCGTSE