| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5160 |
|---|
| Symbol | |
|---|
| ID | 5357371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5306833 |
|---|
| End bp | 5308752 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640814206 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350495 |
|---|
| Protein GI | 152989100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.666513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTATACTG ATCCGTTTTT AAAGAGAAAG AGACTCGTTG TCCTGTCGTT GATGACTTTT
GTCTCTCTAT GTCTCTGGGG ACTTTATGGG CGTGCCCTGG GCTTTGATTA TGTCTGGGAT
GATAGTCTGC TTTTTCTTGA TAAGACGGAT TTGTTGAACT TGCCACTCAG TTGGAAGTTA
CTGGCCGAGC CGGTTCTGCC TGGTACCTCA TACCTGCGGC CTTTGGTGTT TTTGACATTT
TATGTTGAAT TTCATGCTTT CGGGCAGAGT GCACTTGTAT CGCATGCCGT AAATTTAATT
ATATTTAATT TTAACGCTAT TCTGGTTTTT TGGGTTTGCA GGCGCATCGC TTTTCTTCTT
GAACGTTCTT TGCCAGAGCT GTTGGGCTTC CTGGCAGCCA TGCTCTATGT AATTCATCCT
GCACTGGTCG AATCGTCGGT CTGGGTTTCA GGCAGATTTG ATTTGATGGT CACGACTTTT
TTATTGCTGG GTGTGGGCAT ATTTCTGGCG GAAATAAAAT CTGGCCTATT TAGGGTTTTG
CTTTTGTCCG CTTGCATGAT GGCTGCGCTA CTGAGTAAAG AGTTGGGGGT AGTGTTTCCT
GCGTTGATTT TATGTGTGTG GATGGCGCTT AACTGTTCGG CGGAGCCGAT AGGGCGGGGG
CTTTTTTTTG CTGCCTGCTC AAAAAATTTC AAGGTACTGT TCGGGCTGGT TTTGACAGTT
CTTTTTTATT TTGTCGTGAG GGAGTTTTCG GCTGGGGGGT TTTATCATTC GCCTCTAACC
ACGGAGTATG CAAAAGACGC GATTTTGTAT CAGCGACTTC CGCTAGAAGC ATTGAAGTTC
TATTTGCTGC AAAGCTTCCT GCCGTTTTAT TCTATAAGTC CCCTTCATCC TGTTTCTGAG
TATCAGGAAG GAGGGGTGCT GCTTTCAGCT TTAGGGCAAC TGTGTACGCT GCTACTTTTA
TTGGGAGTAG GGTACATGGC TGCTTATAGG CGTTCGGTGG CTGCTTGGCT TGCCATTGCT
TATTTGGTTT GCCTGCTTCC GGTTGTCCAT ATAATTCCGA TGACGATAGG TGGAAATCTT
GGGCATGAAA GATTTTTAAC TGCACCTTTA GCTTTTCTTG CGATGTCCGT GGTGTTGGTG
CGTTATGACT TGTTTTTCTC TTGCTTGAGA CTGGCGCGGC CTGCTTATTT GCGAGTACTT
ACTTTTGCAA CATTTGTCTG GCTCGTTGCT GCAGGGTTTA CAGTTAACGG GATCCTGCCA
ATGTGGTCCT CGGAGGTTTC ACTGTGGACG TGGGCCTATA AAGATCATCC AGATTTTCAA
TATGCCAGAT ATAACTACTT GTATGGTGCG TCTCGTTTTT ATCGATATGA TCTCGTGGAC
AAAGAAGTGG AAAGGCTGCA GCGTGAGAGA GGAGGGCTGG AGGTTTCTGA GCAGTTACTG
TATGCAAATC GGCTGATAAG AACTGGCGAT GCCGAAGGTA TGAAATATCT CGAAGGCGTG
ATTTATGCTT TTCCAAAGTT TCATGAGGAG AAGGATGGTC GGAGCGCGAT GAAGAATTTT
ACCTTGCTTA CCTCCATGCA GATGGGGGGG GCTTATGCCG ATTATGCTAA TGCGCTCATG
ATATTTAAAG GGGATGCTGA AAAAGCCTTG AAATATAGTG TTATTGCTGA ATGGTATTTA
GGGAAGGGAG AGCTGATTCC TTTGATGTAT CAACGTAGCG CTATTTTTTA TGCTTTAGGT
GAGTATTCGC GCGCTGAACG TATTTATAAT GAGCAGGAGC GCTATCGGTA TTATATGAAG
AGTGGGATGA GATATAATTT TTCTTCTTTG TTGAAAGGGT TCTGTAAAGC TAGTTCATAT
AAAAAAGAAT CTTGTGGTGA AATGATTCGT AGAGGGATTA TTTTAAATGG TGGTGTGTGA
|
|---|
| Protein sequence | MYTDPFLKRK RLVVLSLMTF VSLCLWGLYG RALGFDYVWD DSLLFLDKTD LLNLPLSWKL
LAEPVLPGTS YLRPLVFLTF YVEFHAFGQS ALVSHAVNLI IFNFNAILVF WVCRRIAFLL
ERSLPELLGF LAAMLYVIHP ALVESSVWVS GRFDLMVTTF LLLGVGIFLA EIKSGLFRVL
LLSACMMAAL LSKELGVVFP ALILCVWMAL NCSAEPIGRG LFFAACSKNF KVLFGLVLTV
LFYFVVREFS AGGFYHSPLT TEYAKDAILY QRLPLEALKF YLLQSFLPFY SISPLHPVSE
YQEGGVLLSA LGQLCTLLLL LGVGYMAAYR RSVAAWLAIA YLVCLLPVVH IIPMTIGGNL
GHERFLTAPL AFLAMSVVLV RYDLFFSCLR LARPAYLRVL TFATFVWLVA AGFTVNGILP
MWSSEVSLWT WAYKDHPDFQ YARYNYLYGA SRFYRYDLVD KEVERLQRER GGLEVSEQLL
YANRLIRTGD AEGMKYLEGV IYAFPKFHEE KDGRSAMKNF TLLTSMQMGG AYADYANALM
IFKGDAEKAL KYSVIAEWYL GKGELIPLMY QRSAIFYALG EYSRAERIYN EQERYRYYMK
SGMRYNFSSL LKGFCKASSY KKESCGEMIR RGIILNGGV
|
|---|
| |