| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4975 |
|---|
| Symbol | |
|---|
| ID | 5354905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5131724 |
|---|
| End bp | 5132647 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640814022 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350312 |
|---|
| Protein GI | 152984960 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.376077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCA TTTTTCTGAG CCGGCGTCAT GGGGCCGCTC GCTCCGTCCA TCTGCAGCCG
CGGCTGCTGA TGCTGGCGGG GGCCTGCGTG GTCGGCGCCA GCCTGTTGGC GGGGGGCTTC
ATGGGCGCCT GGCTGTTCCG CGCGCCGGCG CCGGCGGTGG GTACCGAGGT CGATGCCGCT
CTGCAGGCGC AGAGCGACGA GATCAGCAGC GCGCGCGAGG ATGCGCAGCG GCAGATGGAC
GCGCTGAGCG TGCATCTAGG TGAGCTGCAG GCACGCCTGG TGCGGCTGGA TGCCCTGGGG
GAGCGCCTTA CCGAACTGGC CGACGTCGAC CCCGAAGAGT TCGACTTCTC CCTGGGCGTC
GGCCAGGGCG GCGTCGATGA ACCGCTGGAG GGCAACGCCT ATGCCCCGCC GTCGTTCATG
GCGACGCTGG ACGAACTGGC GGCACGCCTG GATACCCGCG AGCAGCAGCT CGAGGTACTC
GAGCAACTGC TCGCCGACAA GCACATCAGC CAGTCGACCT ACCTGGCCGG CCAGCCGGTG
CGCCAGGGCT ACATCTCCTC GCCGTTCGGG CGCCGGGTCA ATCCGGTGAG CGGGCGCCTG
AGCCTGCACA AGGGCATCGA CTTCGCCGCG CCGGCGGGCA GCGACGTGGT GGCCGTGGCG
GCCGGCGTGG TGACCTGGTC CGGGCGCAAG AACGGCTACG GCAACGTGGT GGAGGTCGGT
CATGCCGATG GCTATACCAC GCTCTATGCG CACAACCAGA AGAACCTGGT CGAGGTCGGC
GACCTGGTCA AGCGAGGCCA GGTCCTGGCC AAGGTCGGCA GCACCGGACG CTCCACCGGT
TACCACGTAC ATTTCGAGGT GATGAAGGAT GGCCGGGTAA TGAATCCGCA AAGCTTCATC
GCGCGCGCGT CTGTTTCCGA GTGA
|
|---|
| Protein sequence | MHIIFLSRRH GAARSVHLQP RLLMLAGACV VGASLLAGGF MGAWLFRAPA PAVGTEVDAA
LQAQSDEISS AREDAQRQMD ALSVHLGELQ ARLVRLDALG ERLTELADVD PEEFDFSLGV
GQGGVDEPLE GNAYAPPSFM ATLDELAARL DTREQQLEVL EQLLADKHIS QSTYLAGQPV
RQGYISSPFG RRVNPVSGRL SLHKGIDFAA PAGSDVVAVA AGVVTWSGRK NGYGNVVEVG
HADGYTTLYA HNQKNLVEVG DLVKRGQVLA KVGSTGRSTG YHVHFEVMKD GRVMNPQSFI
ARASVSE
|
|---|
| |