Gene PSPA7_4468 details

Gene Information

• Locus tag: PSPA7_4468
• ID: 5357221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 4599706
• End bp: 4601682
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640813516
• Product: SNF2 family helicase
• Protein accession: YP_001349818
• Protein GI: 152984418
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0553] Superfamily II DNA/RNA helicases, SNF2 family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGTC CACGCCTGAT CAACCGTACC TCCGCGACAC CTTCGACGCT TCTGCAGCGG 
GCGATCTTCG ACGGCTACGA CTTCGGCTTG AAGATCCCCT ACATCGCAGG CAGCAACCGC 
GCGCTGCTAG AGCTGTCCGG CTTCTTCATC AGCGCCCGGG AGCATCCGTT GCACCGCTAC 
TGGCGGGTCC CCAAAGGCAA GCTGCTCCCT GAACTGGACA CTCTGTACAA CCGTCTCGCC 
GAGCTCGCTG GAGGCCTTCA CTCCCAGTCC TGGCGGGAGT TCAGCTCCTT GGTCGAATCC 
GCGCAGGCCT CGCTTGACCG ACAGGCCTTC ACCTGGGGGA TGCTGCTGCG CATCGCGCCC 
CTGGCCGAGG GCGGCGTCCT ACTGTCAGGC GAGTTCCATC CTGGTGTGGT GGCGGTGGCT 
CGGCGGATGC GCGGGGTGTT CCTGCGCCCA TCGAGTTCCT GGCGCATCGA CACCACTCCC 
GAGCTGCTTC GAAGCAACCT GATTCTGGAG CTTGGCCTCG CCGAGGAACA ATTCGAGATT 
CTGGATACTG TCCAGGAGCT GCTCAGCGAC GGCAGCTTCG CGCCGTCGAC CGAGCTGCCC 
AGCATGAGCA TCGGCGGTCC ACAGCAGGAA CCGGCAGCGC CATCCCTGGA GGACGAGTCA 
GCCTCTGACA TCTACCTCGC CGCGGTGCCG GAGATCGAGC GTACCGAGTA CAGCTCGGCT 
GATATCGAGG CGGCGCTCCA GGGCTACTCA CTACTGGCCC ACCAGCCTGA CGGCATCGCT 
CATCTGCTGC AGAGGACCAG CGCCTTACTG GCCGACGACA TGGGACTGGG CAAGACCCGC 
CAGGCGGTCA TCGCCGCTTC GATCCGCGCG GCGGGCAAAC CAATTCTGGT CATCACCCTG 
GCCACCCTGC TGATCAATTG GCAGCGGGAG ATCCAGGAGG TCTATCCCTC GGCCACCGTG 
GCCATCCAGC AGGACACCCC AGAGGCGCAG TGGATACTCG TTAACTACGA GCAGTTGAGC 
CCCCTCGTCG CCAACGCTTC GCGCTTCGCC GTGATGGTCA TCGACGAGGC GCAGCGGATG 
AAGGAACCGA CGGCGCAATG CACGCGGCAC GGTTTCGACA TTGCCGCCCA AGTGCCGAAC 
CGCTACCTGC TTACCGGCAC GCCGGTGCTC AACCGCGAGA CCGAGCTGCA CACCCTGCTG 
CGCCTCTCGG GCCACCCCAT CGGCCAACTG CCGCTGAAAG AGTTCTGCGA CCGTTTCGCC 
GGCAACCCGG AGTTCCGCCA GAGTCTGCGG GCGGAGCTGG GTGACTGGAT GCTGCGCAGG 
CGCAAAGATG TGCTGCCCAG CCTCAAGGGC AAGCAGCGGC AGTTGCTGAA GGTGGCCCTC 
TCCACCGAGG AACGCCAGCA ATACGACGTG CTGCGTCTCG AGGACCGACC GGTCTTCGCG 
CGACTCGGCG CGCTGCGGCG TTACCTGGAA ACGGTGAAGG TTCGCGTGGC GATGGACCTG 
TTGAGCGAGC TCGACGCCGA GGACAAGGTG ATCCTGTTCT GCGAGTTCAA GCCGACCGTG 
GCTGCGCTGA AAGAACTCTG CGAGCAGGCC GGGCACGGCT GCGTCACGCT GGTGGGCAAT 
GACTCGCTCA CCAAGCGGCA GAAAGCGATC GATCGCTTCC AGCAGGATCC CGACTGCCGG 
GTGTTCATCT GCACCACGGC GGCCGCCGGG ACGGGCAACA ACCTCACTGC GGCGAACTAC 
GTGTTTTTCC TCGGTCTGCC CTGGACTCCC GGTCAGCAGG AACAAGCCGA GGACCGCGCG 
TACCGCAACG GCCAGCTCCG CATGGTGGTG GTGAAGATCC CACTGGTCGA GGGCACGATC 
GACGAGCAGC TGTGGCAACT GCTCAACGCG AAACGCCAGG TAGCCCAGGA CCTCATCGAG 
CCAGAGCAGG TTGACGGAAA CCGTGCGCTT TTGGCCGCAA GCCTTGCCGA ACGCTGA 

 

Protein sequence

MNRPRLINRT SATPSTLLQR AIFDGYDFGL KIPYIAGSNR ALLELSGFFI SAREHPLHRY 
WRVPKGKLLP ELDTLYNRLA ELAGGLHSQS WREFSSLVES AQASLDRQAF TWGMLLRIAP 
LAEGGVLLSG EFHPGVVAVA RRMRGVFLRP SSSWRIDTTP ELLRSNLILE LGLAEEQFEI 
LDTVQELLSD GSFAPSTELP SMSIGGPQQE PAAPSLEDES ASDIYLAAVP EIERTEYSSA 
DIEAALQGYS LLAHQPDGIA HLLQRTSALL ADDMGLGKTR QAVIAASIRA AGKPILVITL 
ATLLINWQRE IQEVYPSATV AIQQDTPEAQ WILVNYEQLS PLVANASRFA VMVIDEAQRM 
KEPTAQCTRH GFDIAAQVPN RYLLTGTPVL NRETELHTLL RLSGHPIGQL PLKEFCDRFA 
GNPEFRQSLR AELGDWMLRR RKDVLPSLKG KQRQLLKVAL STEERQQYDV LRLEDRPVFA 
RLGALRRYLE TVKVRVAMDL LSELDAEDKV ILFCEFKPTV AALKELCEQA GHGCVTLVGN 
DSLTKRQKAI DRFQQDPDCR VFICTTAAAG TGNNLTAANY VFFLGLPWTP GQQEQAEDRA 
YRNGQLRMVV VKIPLVEGTI DEQLWQLLNA KRQVAQDLIE PEQVDGNRAL LAASLAER