| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4370 |
|---|
| Symbol | |
|---|
| ID | 5354107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 4500415 |
|---|
| End bp | 4501296 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640813419 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_001349723 |
|---|
| Protein GI | 152987560 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTACGCTC CGGAAGGTCA GAATATATTC ACCATCGTGA ATGTCAATCA GAATACTGAA
CAAGAAAGAG GAAGAATGAC CAAGGACGCC CCAAGCAAAA GCGCCGGCGG CAAGGATGTC
GGCGCCGTCG TGAATGCCAT CCAGATACTT CGCCACCTGG CCCATGCCGA CGGCGCGCAA
GGCGTGGCCG CCATCGCCCG CGCCACCGGC ATCAGCCCGA GCAGCGCGTT CAACATCCTG
CGCACCCTGA GCAACGAACG CCTGGCCTCG TTCGACGACG CCAGCAAGAC CTACCAGCTC
GGTCTCGGCC TCTCGGAACT CGCCGTAGGA TTCTTTGGCC GCAGCTATGC CGACCTGATC
CAGCCGGAAC TGGAACGCCT GAGCATCGCC CACCACATCC TCGTCGCCCT GTGGCAGGTG
ACCGACGACG CGCACATCCG TGTCATCGCC CTCGCCGCCC CGCCCGTCGC CCATGTCAAC
GTCGCCATCG GCACCCGCCT GCCGGAACTG GTCGGCGCCG CCGGACGCTG CATCGCCGGC
CTGCGCAGGT TGCCGGAGGA CGAACTGCGC AGGCGCCTGA CCCGGGTGCG CTGGGAAAAC
CCGCCGAGCT TCGAGCAGTA CCAGGCCGAA GCGGCCGACG CCGCCGCGCG CGGCTGGGCC
ATCGACGAGG AGCACCTGTA TCGCGGCGTC AGCATGGTCG CCAGCGCCAT CGTCGACCAC
GACGAGCAGC CGCGCTTCGC CATTTCCGCC ATCGGCATCA GCGCCCAGCA CCAACCCGAC
GATCTGGAAC GGATCGGAAC CGACCTGCGG GATACCGCGC GCTTCGTGAG CCGCGCGCTG
TTTCCACAGA ACGTGGCACA CAAAAGCACG GCCAAGGAAT AG
|
|---|
| Protein sequence | MYAPEGQNIF TIVNVNQNTE QERGRMTKDA PSKSAGGKDV GAVVNAIQIL RHLAHADGAQ
GVAAIARATG ISPSSAFNIL RTLSNERLAS FDDASKTYQL GLGLSELAVG FFGRSYADLI
QPELERLSIA HHILVALWQV TDDAHIRVIA LAAPPVAHVN VAIGTRLPEL VGAAGRCIAG
LRRLPEDELR RRLTRVRWEN PPSFEQYQAE AADAAARGWA IDEEHLYRGV SMVASAIVDH
DEQPRFAISA IGISAQHQPD DLERIGTDLR DTARFVSRAL FPQNVAHKST AKE
|
|---|
| |