| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3612 |
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| Symbol | |
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| ID | 5355735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3740495 |
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| End bp | 3742282 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640812662 |
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| Product | hypothetical protein |
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| Protein accession | YP_001348966 |
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| Protein GI | 152988907 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.332362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTTA ACCACTACTA CCAGAGCGAA CTCACCGCAC TGCGACAGTT GGGACGCCGT
TTCGCCGAGC GCAGCCCAGC CTTGGCGCCG TTCCTCGGTC AGGCCGGGCG CGATCCGGAC
GTCGAGCGGC TGCTCGAGGG CTTCGCCTTC CTGACCGGAC GGTTGCGGCA GAAGCTGGAC
GACGAGTTGC CGGAACTCAG CCACTCGATG ATGCACTTGC TGTGGCCGAA CTATATGCGC
CCCTTGCCGG CGTTCAGCAT CCTCCAGTTC GACCCGCTGA CCCGACCAGG CGAAGCACTG
CGCGTGGAAC GCGATACCCC GGTGGAAAGC CGGCCGGTAG GCGAGGTCGC CTGCCGCTTC
CGCACTTGCT ATACCACCGA AGTCCTGCCG CTCACCCTGA AGGCGCTGAA CTACTCGGTG
ACTGGCGACG GCGCATTGCT GGGCTTGCGA CTGGAGATGA ACTGCGACGG GCATCTCGGC
GAGCTGCGAC TGAATCGTCT GCGCCTGCAC CTGACTGGCG AGCGTTACAT CAGCCAGATG
CTCTACCTGT GCCTATTGCG CAATCTGGAC AATATCCAAC TGATCCCGTT AGGCGCCCAG
GGGCTTCCGC TCGATGGGGT CGACGGCAAG CCGCTGGCGT TTCGCCTGGC GGGCGAGCGG
GTGCGGCCGG TGGGGTTCGC CGAGGACGAG GCGCTGATTC CCTATCCGCT GAATACCTTC
CGCGGCTACC GCTACCTGCA GGAGTACTTT GCGTTCCAGG ACAAGTTCCT TTTCGTCGAC
GTCGATGGAC TGGAGCTGCT CGACAGCCTG CCCGATGACC TCCTCAAGCA GGTTCGTGGC
CTGGATTTGC GTTTCGATAT CCGCAAGAAC GGCATCCAGC GCCTGCACCC GACGCTGGAG
AATATCAGGC TGTACTGCAC TCCGGTGGTC AACCTGTTCC GCCATGATGC GCTACCTATC
CGTCTCGACG GCAAGCAGGA CGAGTACCTG CTTATGCCGG TCAGATACGC CCTGGAGGAC
TGCGGAGTGT TCTCGGTGGA AAGTGTCACC GGCTGGCGGC CGGGCGGACT AGGCTACCGG
GGATATGTGC CGTTCGAATC GTTCGAGCAC GATCCCAGCT TCGATGTACC CGAGGCTCGT
CCCCATTACA GCATCCGGCA ACGCACCTCG CTCCTGCATG ATGGCCTGGA TACCTACCTG
AGCTTCGGCA TCCGCCATCC CGAGCAGATC GAGACACTGT CGGTGGAGCT TACCTGCACG
AATCAGAACC TGCCGCAGCG GCTGCGCCTG GGCGACATCT GCGTCGCCTG CGAAGGCACA
CCGGAGTTCC TCGGTTTCCG CAATATCACC CCGGCGACCC CGAGTTACGC GCCGCCGTTG
CACCGCGACT TCCTCTGGAA GCTGATCAGC AACATGTCGC TCAACTACCT GTCTTTGGCC
AACGTCGATG CACTCAAGGT GATCCTCGAA ACCTACGACC TGCCGCGCTA CTACGACCAG
CATGCCGCGA AGGTCAGCAA GCGCCTGCTG GGCGGGCTCA AGGCGGTCCG CCACGAGCAT
GTCGACCGCT TGCACCGAGG GCTGCCGCTG CGCGGCTTGC GTACCGAGCT GACGATCGAT
CCGGAAGGCT ATATCGGCGA GGGCGACCTG TTTGTGTTCG CTTCGGTTCT GAACGAATTT
TTCGCACTTT ACGCCAGCAT CAACTCTTAC CACGAATTGC GGGTGAGGAG CACACAGGGA
GACGTGTACC AATGGAAACC GCGCATGGGT TTGCAGCCCC TGCTGTAA
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| Protein sequence | MPFNHYYQSE LTALRQLGRR FAERSPALAP FLGQAGRDPD VERLLEGFAF LTGRLRQKLD
DELPELSHSM MHLLWPNYMR PLPAFSILQF DPLTRPGEAL RVERDTPVES RPVGEVACRF
RTCYTTEVLP LTLKALNYSV TGDGALLGLR LEMNCDGHLG ELRLNRLRLH LTGERYISQM
LYLCLLRNLD NIQLIPLGAQ GLPLDGVDGK PLAFRLAGER VRPVGFAEDE ALIPYPLNTF
RGYRYLQEYF AFQDKFLFVD VDGLELLDSL PDDLLKQVRG LDLRFDIRKN GIQRLHPTLE
NIRLYCTPVV NLFRHDALPI RLDGKQDEYL LMPVRYALED CGVFSVESVT GWRPGGLGYR
GYVPFESFEH DPSFDVPEAR PHYSIRQRTS LLHDGLDTYL SFGIRHPEQI ETLSVELTCT
NQNLPQRLRL GDICVACEGT PEFLGFRNIT PATPSYAPPL HRDFLWKLIS NMSLNYLSLA
NVDALKVILE TYDLPRYYDQ HAAKVSKRLL GGLKAVRHEH VDRLHRGLPL RGLRTELTID
PEGYIGEGDL FVFASVLNEF FALYASINSY HELRVRSTQG DVYQWKPRMG LQPLL
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