| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3090 |
|---|
| Symbol | |
|---|
| ID | 5359687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3202837 |
|---|
| End bp | 3204909 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640812141 |
|---|
| Product | ferric vibrioferrin receptor |
|---|
| Protein accession | YP_001348450 |
|---|
| Protein GI | 152986627 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0290295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA CAATCCCATT ACTTGCCCTT CCCTTCAGCC TCCTGGCCCT TGGCATCGCG
AATGCCGCGG AGGAGGAAGA CGCCGCCCTG GACCCGATGG TGATCAAGGG CGACGTGCTC
GGGAAAGCCA GCGATCCCGA GGTGCTCACC TACAGCGGCA GCCGCAGCGT GGTCGATGCG
CAGGACCTGA GCAAAGGCAG CGTGCGCGGC CTGGACGACG CGTTGCAGCG GGTCCCCGGG
GTGAAGATCT TCGACGAGAC CGGCACCGGC GCGCTGCCGC AGATTTCCGT CCGCGGTCTC
TATGAAAGCC GCAGCGGGCG CATCCAGGCG TTGTCCGACG GCGTCCCGCT GGCGCTGGCG
CCCTACGGCC AGACCGGCAT GTCGCTGTTC CCGATGACCC TGGCGACCAT CGACCGGATC
GACATCGTGC GCGGCGGCGC GGCGGTCCAG TACGGCCCGA ACAACGTCGG CGGGGTGATC
AACTTCATCA GCCGGCCGAT TCCGCGCGAG TGGGAAACCA CCCTGCAGGA ACGCACCACC
TTCGCCCCGG GTGGACGGCA GCTGTGGGAC AGCTACCTGG GGACCGGCGG CTACCTGACC
GACAACTTCG GCCTGCAGCT GGACCTCAAC ACGGTCAACG GCGAGTACGG CCGCGAGCAC
TCCGACACCG ACATCCAGAA CTACCGCCTG CGTGGCCAGT GGCTCATCGA CGACGACCGC
GAGCTGACCT TCGGCGTCCA GCGCTATGTC GCCGACATGG ACCTCGCCGG CGCCCTGAGC
GTCAGGGACT ACAAGGACGA CCCACGGCAA TCCACCCGCC CGCTGGACCG CTTCGAGGGC
GATACGGACC GGGTCTGGGG CACCTATACC CAGTACTTCG GCGCGGTCGG GCCGTTCGAC
TCGGTGGAGT TCAGCTGGAC CAACTTCGCC CACAACAGCT ATCGCAACTT CGTCGTCGGC
CTGCCATTCA CCCCGGATGC GCAGCCCGTG ACCAAGCAGG ACGGCCCGCG CGACTTCAAG
GTCTGGGGCA GCGAGCCGCG CCTGAGCATG AGCATCGACG GCGATAGCAT CGGCCAGACC
TGGCTGCTCG GGGCGCGCTA CGTGAAGGAG GACATCGACT ACCGGGTCGA CCGGCAGAAC
CTGAACAGTG GCGTCACCAG CGTGTTCCGC GACTGGAGCT TCGACAACGA TGCCAAGGCC
TTCTACCTGA GCAACGCCAT CAGCCTGCTC GACCATCGCC TGACCATCAC TCCCGGGGTG
CGCTACGAAA ACGCGACGAT GGACTACTCC GACAGCGTCA CCGGTTTCCA GCGCACCAAC
AAGGCCAAGG AGTGGTTGCC CGGCCTGACC GTAGGCTTCC AGGCCACCGA GGAATGGTTC
GTCTACGCCA ACGCCCAGCG CTCCCTGCGC CCGCCGCAGG TCACGCAGAT CGTCAAGGAG
GGCGCGGTGG ATGCGGAGAT CGCCTGGAAC TACGAGACCG GCGTGCGCTA CACCCCCTGG
AGCGGCCTGC GGGTGGACTT CGGCCTGTAC CGCATCGATT TCGACGACCA GATCGAATAC
AACGCCAGCA CCGACCGCTT CGTGAACCTC GGCAGCACCC GCCACCAGGG GATCGAGACG
GAGATATTCT GGTCGCCCGA AGCCATCCGC GGCCTGGAAC TGCATGCCGG CTATGCCTAC
CTGGACGCCG AGCAGCGCAG CGGCCAGTAC GCGGACAACG AAGTGCCCTA CGCTTCCAGG
CACCAGGTCA TTCTCGACGG ACGCTATCGC TTCGCCGAGT TCTGGACCTA TAGCCTGGAC
GGCCTCTACG TCAGCAAGAG CTTCACCGAC GCCGCCAACA GTCATGCAGA GAACGCCACG
GCCTCGGTCG GCGAGTTGCC GTCTTACTGG CTGTGGAACA CCGCCATCGA GCGGGAATTC
AAGTTCGCCA ACAAGAGCCT GCTGACCGCC TCCGCCGGCA TCAGCAACCT CTTCGACCGC
CAGTATTACT ACCGCGGTAT CGATACCAGC CCGTGGGGCC GCCAGCCGGC GCCAGGACGG
ACCTTCACGG TCGGTCTCAA CTACCGCTTC TAA
|
|---|
| Protein sequence | MKTTIPLLAL PFSLLALGIA NAAEEEDAAL DPMVIKGDVL GKASDPEVLT YSGSRSVVDA
QDLSKGSVRG LDDALQRVPG VKIFDETGTG ALPQISVRGL YESRSGRIQA LSDGVPLALA
PYGQTGMSLF PMTLATIDRI DIVRGGAAVQ YGPNNVGGVI NFISRPIPRE WETTLQERTT
FAPGGRQLWD SYLGTGGYLT DNFGLQLDLN TVNGEYGREH SDTDIQNYRL RGQWLIDDDR
ELTFGVQRYV ADMDLAGALS VRDYKDDPRQ STRPLDRFEG DTDRVWGTYT QYFGAVGPFD
SVEFSWTNFA HNSYRNFVVG LPFTPDAQPV TKQDGPRDFK VWGSEPRLSM SIDGDSIGQT
WLLGARYVKE DIDYRVDRQN LNSGVTSVFR DWSFDNDAKA FYLSNAISLL DHRLTITPGV
RYENATMDYS DSVTGFQRTN KAKEWLPGLT VGFQATEEWF VYANAQRSLR PPQVTQIVKE
GAVDAEIAWN YETGVRYTPW SGLRVDFGLY RIDFDDQIEY NASTDRFVNL GSTRHQGIET
EIFWSPEAIR GLELHAGYAY LDAEQRSGQY ADNEVPYASR HQVILDGRYR FAEFWTYSLD
GLYVSKSFTD AANSHAENAT ASVGELPSYW LWNTAIEREF KFANKSLLTA SAGISNLFDR
QYYYRGIDTS PWGRQPAPGR TFTVGLNYRF
|
|---|
| |