| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3026 |
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| Symbol | |
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| ID | 5354963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3124791 |
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| End bp | 3126113 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640812077 |
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| Product | shikimate transporter |
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| Protein accession | YP_001348386 |
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| Protein GI | 152988014 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.20137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACATCA TTCAGCAACG CGTCGCCGCG AGCGACATCC AGGCCCGGGG AGGGCGGTCG
GACCTGCGCA CGCGGGCGAT CGCGGTGGGC ATCGGCAACT TCATGGAATG GTTCGACTTC
GCCATCTACG GCTATTTCGC CGCGATCATC GGCACGCTGT TCTTTCCTTC CGCCGCGCCG
GGGATCTCGC TGCTCTCCTC GCTGGCGGTC TTCGCCGTGG GCTTTCTCTC GCGCCCGTTC
GGCGCGCTGC TCCTCGGCCC CATCGGCGAC CGCCTGGGCC GTCGCGCGGT GCTGATCGTC
ACGGTGTTCG GCATGGGCTT GTGCACCACG ATCATCGGCC TGCTGCCGTC CTACGCGGCG
ATCGGTATCG CCGCGCCGAT CCTGCTGATC GTCATGCGTT TCATCCAGGG CATGATGGTC
GGCGGCGAAT GGTCCAGCGC CGGCATCTAC ATCGTCGAAA GCGCGCCGGC CGACCGCCGC
GCCACGGCGG CCAGCGTGAT CACCGGTACG GCCGGCCTGG CGTTCCTGTT CGGCACCTTC
ACCGCGGCGG CCATCTCCAG CGGGCTCAGC GAGGAGCAAC TGCATGCCTG GGGGTGGCGC
CTGCCGTTCG TGGCCTCCAT CGTCATGACC GGCATCGCCG TGTTCATCCG CCGCCGGCTC
GGCGACACGC CGGTCTACGA AGCGCTGCAA CGGCAGCGCC GCGAGCAGCG GGTCCGGGAG
CCGAGCCGCG CGGTGCGCCG GCGGGCGTTC GTCACCAGCT TCGCGTTCTC CGCGCTGTTC
GGCGTGTCGC TCTACTACTT CATCACCTAC GCCAACAACC ACCTGGTCGC GACTGTCGGC
CTGCCGCGCA GCAGCGCACT CTGGCTGTGC AGCCTGGCGC TGGTGGCGTA CTGCATCGCC
AACCCGCTGG TCGGTCGCTT CAGCGACCGC TTCGGCCGCC GCCGCCTGCT GCTCGCGGCC
GCCGCCGCGC TGACCCTGCT GGCCTATCCG GTCTTCCTGT TGCTCAACAG CGGCCAGCCG
CCGGCGATCC TGCTCGGACT GGTCATCCTC GGCCTGCTGG TGGCGGTTAC CGCGGTGATG
GACGTGGTGC TGCTGGTGGA AGTGTTCCCG GCCTCGATCC GTTCCAGCGG CGCCGCGCTG
GGCCATAACG TGGCGCTCGC GCTGCTCGCC GGCCCCGGGC CGTTCATCGC CGCCGCGCTG
ATCCGCCAGA CCGGCGACGC CAACCTGCCG GCGGCCTACC TGGCGCTGGT TTCCCTGGCC
TGCTTGCTGG TGCTGTGGAA GACCCTGCCG GAAACCCGTG ACAACGACAT CACCCAGTAC
TAG
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| Protein sequence | MDIIQQRVAA SDIQARGGRS DLRTRAIAVG IGNFMEWFDF AIYGYFAAII GTLFFPSAAP
GISLLSSLAV FAVGFLSRPF GALLLGPIGD RLGRRAVLIV TVFGMGLCTT IIGLLPSYAA
IGIAAPILLI VMRFIQGMMV GGEWSSAGIY IVESAPADRR ATAASVITGT AGLAFLFGTF
TAAAISSGLS EEQLHAWGWR LPFVASIVMT GIAVFIRRRL GDTPVYEALQ RQRREQRVRE
PSRAVRRRAF VTSFAFSALF GVSLYYFITY ANNHLVATVG LPRSSALWLC SLALVAYCIA
NPLVGRFSDR FGRRRLLLAA AAALTLLAYP VFLLLNSGQP PAILLGLVIL GLLVAVTAVM
DVVLLVEVFP ASIRSSGAAL GHNVALALLA GPGPFIAAAL IRQTGDANLP AAYLALVSLA
CLLVLWKTLP ETRDNDITQY
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