Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3023 |
Symbol | |
ID | 5357904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3121415 |
End bp | 3121963 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640812074 |
Product | fimbrial subunit CupA1 |
Protein accession | YP_001348383 |
Protein GI | 152987917 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.143377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTC AAGCATCTGC CCTGGCTATC GCTACGCTGC TCGCGGTGCC GGCCATCGCA TCGGCGGCCA ATACCATCAC CTTCAATGGC GAAGTGACCG ACCAGACCTG CTCGGCCATC GTCGATGGCA ACACCGACCC CACCGTGATG CTCAACAGCG TGCCGGTCAG CGCCCTGAAC GGTACGGTCG GCAAGACAGC CGGCGAAACC AGCTTCACCC TGCAACTGAC CGGCTGCGCC GCGCCGGGCA CCGGTGAAGA GGAACACTTC TCGGCGCTGT TCCAGGCCAC CAACGCGACC ACCGCCGGCA ACCTGACCAA TACCGCCAGC GGCGGCGCCA CCGGCGTGGC CCTGCAACTG CTCACGGCGC CGGGCGGTAC CGCGGTCAAC CTGGCTGGCG GCGCGGCCGT GGCCGCCGGC GACATCGTGC TCGCCGAAGG CCAGACCAGC ACCAGCTACG ACTACGCCGT CCAGTACGTT TCCGAGGCGG CTACCGTCAC CCCCGGGCCG GTGCTCGGCT CGCTCACCTA CACCCTGCGC TACGAGTGA
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Protein sequence | MKLQASALAI ATLLAVPAIA SAANTITFNG EVTDQTCSAI VDGNTDPTVM LNSVPVSALN GTVGKTAGET SFTLQLTGCA APGTGEEEHF SALFQATNAT TAGNLTNTAS GGATGVALQL LTAPGGTAVN LAGGAAVAAG DIVLAEGQTS TSYDYAVQYV SEAATVTPGP VLGSLTYTLR YE
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