Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3001 |
Symbol | |
ID | 5354199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3091420 |
End bp | 3092856 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640812052 |
Product | hypothetical protein |
Protein accession | YP_001348361 |
Protein GI | 152986990 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.407435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGTTGG GAAACCTCGT CGCTGTCGTC TTCGGCCTGG CGTTCGGCGG AGCGCTGCTG TTGCTCAGCC CGGCCAAGGC CGGCGCCGCC ATGGTCGGCC TGGCGGCCGC GGTCACCATC CTGCGCTTCC CGTTCTGGGG GCTGCTGCTG TTCGCCCTGG TGGCCACCTT CATGCCCTAC TCCACGGTCA ACGTGGGGAT CCGTTCGACG GTCAGCGAAG CGATCCTCGC CCTGACCTGG GGCGCGGTGC TCTGGCACAT CTTCCTCTCG CGCCTGCCGC CGGCGCCGGC GCTGCGCTAC CGCTCCACCG AGCGCATGCT GCTGTGGCTG ATGCTGTTCA CCGCGCTGCC GTTCGTGGTC GGCCAGGTCA GCATCAAGGC CGAGGCCAGC GGCCTGTCGA ACTGGCTGCG CTGGCTGCTC AACCTGTCCA TCGTGTTCCT CGCCGGACGC CTGCTGGTGG AGCGCAAGAA CCGCGAGACA CTGGTCATCG CCCTGTTGCT GGGCACCCTG GCGATGCTGC TGATGTCCAT CGCGGTGTTC ATCCGCTACC GCTCGGCGTC GGGGATGGCG CCGATCCTGG CGCTGTTCAA CTACGCCAAC CTGGACACCC TCAAGTTCGG CCTGGAGGCG CTTTCCTCGC GGATGGGCTC GCCCTGGATG CACCCCAACG CCACCGGCGG GATCATGGCC CTGCTGCTGC CCCTGGCGTT CTGCTACGGG GTCGCCAACC AGGGCTGGCG GCGCGGCCTG GGCCTCGCCG TGGCGCTCCT CGGCGCCGCC GCGATCCTCC TCGCCAGTTC CCGCGGGGCG ATGCTCAGCC TGGCGGTGGT GCTGTTCTGG ATGTCCCTGC GCAAGGTGCC CTACACCGGC CGCCTGCTGT TGCTCGGGGT CGGCCTGGTG GTGGTCCTGG TGCTCAGCTA CCCGCCGCTG CAGGAGCGCC TGGCGACCAT CTTCTCGCCG CAGAACGCCA GTACCGAGGT GCGCTTCGAC GAATACCGGA TGTTCCCCAA GGCCGTCGCC CGCTATCCGC TGGGCATCGG CTTCAAGGTC GACCCGCCGG TGCCGGGCAC CGACCTGCTG GGCATCTCCA ACCTGTGGCT GAACTTCATG TACAAGGTCG GCCTGGGCGG CATGCTGCTG TTCATCGCGG TGACCTGGCG CTGGTGGCGC GAGGCGCGTC CGGAGAAAGG CCCGATCCGC CTGACCCGCG ACAACGCGAT CTGGCTGGGC AGCACCGGCG GCATCCTGGC GGCGCTGGTC AGCGGCCTGT TCGACCACTA CTTCAGCTTC GCCGTGGTGA TGATCGGCCT GTTCTGGCTG CTGGTCGGGA TCAACCTGCT GGAAGCCCGC CGGCTGTTCC CGGAGCGCCA GCCGCAAGTG CGGGCGGTGG GTTATCGCAA GCTCAAGCGG CAGCTCGAGC GCGGGGCCGA GGCCTGA
|
Protein sequence | MSLGNLVAVV FGLAFGGALL LLSPAKAGAA MVGLAAAVTI LRFPFWGLLL FALVATFMPY STVNVGIRST VSEAILALTW GAVLWHIFLS RLPPAPALRY RSTERMLLWL MLFTALPFVV GQVSIKAEAS GLSNWLRWLL NLSIVFLAGR LLVERKNRET LVIALLLGTL AMLLMSIAVF IRYRSASGMA PILALFNYAN LDTLKFGLEA LSSRMGSPWM HPNATGGIMA LLLPLAFCYG VANQGWRRGL GLAVALLGAA AILLASSRGA MLSLAVVLFW MSLRKVPYTG RLLLLGVGLV VVLVLSYPPL QERLATIFSP QNASTEVRFD EYRMFPKAVA RYPLGIGFKV DPPVPGTDLL GISNLWLNFM YKVGLGGMLL FIAVTWRWWR EARPEKGPIR LTRDNAIWLG STGGILAALV SGLFDHYFSF AVVMIGLFWL LVGINLLEAR RLFPERQPQV RAVGYRKLKR QLERGAEA
|
| |