| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2622 |
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| Symbol | |
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| ID | 5359470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2641476 |
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| End bp | 2642915 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640811673 |
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| Product | sugar transporter, glycoside-pentoside-hexuronide |
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| Protein accession | YP_001347984 |
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| Protein GI | 152986710 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.455215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGGG CGCCTTCGAT GGCACAGCAG CGCATTCCGA TGATGCGCAA GATCGCTCTG
GGTGCAGGCG ACTTCGGGGT GAACATCTAT TGGCAGATCG CTTCGCTCTT CCTGCTGTTC
TTCTATACCG ACGTCCTTGG CCTATCCGCC TACGCGGCGG GCCTCATCTA CATGAGCGCG
CTCATCTGGG ACGCCGTCGT CGACCCCTTG ATCGGCGCCC TGGCCGACCG GACGCGGACC
CGCCTGGGCC GCTTCCGCCC CTACCTGCTG CTGGGAGCGC TGCCCCTGGC CGTGGCGTTC
GTCCTGATGT TCCTGCTGCC CCGCGGAGAA GGCCCGCAAT TGCTGGTGTT GACGGCAGCG
ACCCACCTTG CCTTCCGGAC CCTCTTCGCC CTGGTCTCGG TCCCCTATGC GTCGCTCTAC
GCGCGGGTGA CCCGCAGCAG CGAAGAACGT GCGACCATGG CCGGCATCCG CATGGTATTC
GCCATTCTCG CCGCGATGGC GGTGTCGGCG CTGACCCTGC CAGCCGTCCG CTATTTCGGC
GGCGGCGCCT ACTCCTGGGG CCTGGTGACC GCGCTCTTCG CCTGCGCCGC CTGCGTCATG
CTGTGGATCG CCGCGCTGGC GGCAGGGTCC GGCGATGCCT GCGAGGAAGA CACCCCGGCG
GACACCTGGC CCGGCATGCG CTACGCACTC GCCGCGCTGC TGCTCAACCG GCCTCTTCTG
CTAATGCTCG GCATCGCCCT GATGAACTCG TTCGCCGGCA CCTTCTTCTC GAAGAACCTT
CTCTACTACT TCAAGTACGT GCGCAACGAC GCCGACTTCG GCGGCACGGC GCTCGCCCTG
ATGGCTGTCG TCGCGGCGCT CGCCGCCCCG CTCTGGGCAC AGCTGGCGCG CCGCTGCAGC
AAGCGTTTCG CCTTGCTGCT CGGTACGGCG TTCTATGGCC TGGGCTTCGC GCTCTGGTTC
CTGTGCAGCG CTGCCGGCTA CGCCGGGCTC ATGATCGTGC TGACTTTCAT CGCCATCGGC
GTCAGCGCCA ACGCCGTGTG CTTCTGGGCG ATGATCCCAG ATACCGTGGA GTATGGTCAG
TGGCGCTCGG GCATCCGCAC CGAGTCGCTG ATCGTCGGCA CGGTGATCTT CGCCCAGAAA
GCCGCGCTCG GCCTCGCCGC TGGCGCCCTG GGCATGGTCC TGGGAGAAAT CGGCTTCGTG
GCCAACAGCG TGCAGTCGCC GGATACCTTG CAACTGCTCG TGGCCACGAT GTCGCTGGTG
CCGCTGCTGG GCACCACGGG CGTGTTCCTG CTCACCTGGT ACTACCCCAT CGGACCGGAG
CAGCACCGCG AGTTGCTCGA CGCCCTGGCC AGGCAGTCGG CGCCGCGAAA CAACCCGCCG
CCGGAACCTC CTTTCCAGCA GCCCCCTGGT CCAGCGCAAG GGAGCGTGGA ACCTTCCTGA
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| Protein sequence | MDRAPSMAQQ RIPMMRKIAL GAGDFGVNIY WQIASLFLLF FYTDVLGLSA YAAGLIYMSA
LIWDAVVDPL IGALADRTRT RLGRFRPYLL LGALPLAVAF VLMFLLPRGE GPQLLVLTAA
THLAFRTLFA LVSVPYASLY ARVTRSSEER ATMAGIRMVF AILAAMAVSA LTLPAVRYFG
GGAYSWGLVT ALFACAACVM LWIAALAAGS GDACEEDTPA DTWPGMRYAL AALLLNRPLL
LMLGIALMNS FAGTFFSKNL LYYFKYVRND ADFGGTALAL MAVVAALAAP LWAQLARRCS
KRFALLLGTA FYGLGFALWF LCSAAGYAGL MIVLTFIAIG VSANAVCFWA MIPDTVEYGQ
WRSGIRTESL IVGTVIFAQK AALGLAAGAL GMVLGEIGFV ANSVQSPDTL QLLVATMSLV
PLLGTTGVFL LTWYYPIGPE QHRELLDALA RQSAPRNNPP PEPPFQQPPG PAQGSVEPS
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