Gene PSPA7_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_2458 
Symbol 
ID5359798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand- 
Start bp2488426 
End bp2489112 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID640811510 
Productalginate lyase 
Protein accessionYP_001347824 
Protein GI152985223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.116563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTGG ATATCAGCAA GCTGACGATC ACCACGCCGG TGGCGACCTC GGCGACCAAC 
CCCCTGGCCC TGGAACTCAA CGGCGCGCTG GCCGCGGCGC GCCTGCCGGA AGTCGTCTCG 
CTGCAGCCCG ACGAAACCCT GCGTCTGTCC GCGCCGACCC GCGGCGCTTC CAGCAAGAGC 
ACCCGCCGCA CCCGCTGCGA GTGGAAGGAG CCCGGCTACT GGACGCTGGA CAGCGCCGCC 
GTGCACCGCA ACCACCAGCG GATGCGCCTG GTCAAGGTCA ACGCGGCGCA GAAGGTAGTG 
GTGGCGCAGA TGCATGTGAA GGACGACGAT AGCCCGCCCA TCAAGGTGTT CTGGAACAAG 
GGCAGGATCA CCTTCGGATT CCGCGGTGCC TTCGATCAGC CGGCACCGAC GAACAGCACC 
CTGCTGGCGA ACGTGCCGCT GGCCGCCGAC TACGAGGTCG ACATCCAGGT CGACGCCGCC 
GGTAGCGCCA TTGTCAGCGC CACCTGCAAT GGCGCCAGCG CCACCAGCGG GCCGCTGCAA 
CTGGAGCGCA GCTGGTTCGG CCATGCCTTC AACTTTCACG GCGGCGTCTA CAACCAGCTC 
GACTACGACG AATCGACGCC GGCGGAGGAC GGCTCGGTCT GCGTGATCAG CGAACTGGCG 
CTCAGCCATG GGACGCGGTC CGCGTAG
 
Protein sequence
MPVDISKLTI TTPVATSATN PLALELNGAL AAARLPEVVS LQPDETLRLS APTRGASSKS 
TRRTRCEWKE PGYWTLDSAA VHRNHQRMRL VKVNAAQKVV VAQMHVKDDD SPPIKVFWNK 
GRITFGFRGA FDQPAPTNST LLANVPLAAD YEVDIQVDAA GSAIVSATCN GASATSGPLQ 
LERSWFGHAF NFHGGVYNQL DYDESTPAED GSVCVISELA LSHGTRSA